ggKbase home page

H1-18-all-fractions_k255_5465464

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5465464_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..431
DNA (429bp) protein (143aa)
tryptophanyl-tRNA synthetase n=1 Tax=Amycolatopsis methanolica RepID=UPI0003771270
trpS; tryptophanyl-tRNA synthetase
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:AIJ25919.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_5465464_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(541..1227)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036939DC
Putative mutT-like protein {ECO:0000313|EMBL:CEL19048.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
NUDIX hydrolase
H1-18-all-fractions_k255_5465464_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1546..2892)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037B4DF3
histidine kinase
H1-18-all-fractions_k255_5465464_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2889..3602)
DNA (714bp) protein (238aa)
transcriptional regulator n=1 Tax=Actinokineospora enzanensis RepID=UPI000378F6FB
Response regulator receiver {ECO:0000313|EMBL:EWC62771.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
two component transcription regulator, winged helix family
H1-18-all-fractions_k255_5465464_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3883..4956
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000374C376
Uncharacterized protein {ECO:0000313|EMBL:EWC62772.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4953..5978
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003762C0C
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWC62773.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
nodulation ABC transporter NodI
H1-18-all-fractions_k255_5465464_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5975..6847
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKV6_ACTMD
Putative ABC transporter integral membrane protein {ECO:0000313|EMBL:EWC62774.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6874..7878)
DNA (1005bp) protein (335aa)
Fe(3+) ions import ATP-binding protein FbpC (EC:3.6.3.30)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000313|EMBL:AHH94286.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AHH94286.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X9V7_9PSEU
H1-18-all-fractions_k255_5465464_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7878..9452)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000379D05F
Thiamin ABC transporter, transmembrane component {ECO:0000313|EMBL:EWC62776.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC transporter integral membrane protein
H1-18-all-fractions_k255_5465464_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9543..10565)
DNA (1023bp) protein (341aa)
ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037B215A
tbpA; ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIJ25929.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_5465464_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10713..11015
DNA (303bp) protein (101aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003746B54
hypothetical protein
H1-18-all-fractions_k255_5465464_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11008..11424)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FMG7_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM05242.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
H1-18-all-fractions_k255_5465464_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11438..13012)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003601EC3
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:EWC58899.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_14
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13086..13781
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SDY2_9DELT
NIPSNAP
NIPSNAP {ECO:0000313|EMBL:AHY48152.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
H1-18-all-fractions_k255_5465464_15
unknown

Not on your lists

13896..14111
DNA (216bp) protein (72aa)

This feature has no annotations

H1-18-all-fractions_k255_5465464_16
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14131..14709
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036EEA46
Restriction endonuclease {ECO:0000313|EMBL:KIF76506.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14699..15781)
DNA (1083bp) protein (361aa)
GTP-binding protein YchF n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628A14
translation-associated GTPase
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_5465464_18

Not on your lists

15937..19143
DNA (3207bp) protein (1069aa)
Subtilase family n=1 Tax=uncultured organism RepID=T1WAX5_9ZZZZ
Subtilase family {ECO:0000313|EMBL:AGU11659.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
subtilisin-like serine protease
H1-18-all-fractions_k255_5465464_19

Not on your lists

19244..20695
DNA (1452bp) protein (484aa)
AlkA N-terminal domain n=1 Tax=uncultured organism RepID=T1WA22_9ZZZZ
AlkA N-terminal domain {ECO:0000313|EMBL:AGU11658.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative bifunctional transcription activator/DNA repair enzyme AlkA
H1-18-all-fractions_k255_5465464_20

Not on your lists

comp(20940..21938)
DNA (999bp) protein (333aa)
Periplasmic binding protein-like domain n=1 Tax=uncultured organism RepID=T1WAE7_9ZZZZ
Periplasmic binding protein-like domain {ECO:0000313|EMBL:AGU11656.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_21
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22045..23034
DNA (990bp) protein (330aa)
Sugar ABC transporter periplasmic protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HH94_9PSEU
Fructose ABC transporter, substrate-binding component FrcB {ECO:0000313|EMBL:CEL15808.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
frcB; sugar ABC transporter periplasmic protein
H1-18-all-fractions_k255_5465464_22
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23039..24007
DNA (969bp) protein (323aa)
Branched-chain amino acid transport system/permease component n=1 Tax=uncultured organism RepID=T1WBZ9_9ZZZZ
Fructose ABC transporter, permease component FrcC {ECO:0000313|EMBL:CEL15807.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_5465464_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24004..24717
DNA (714bp) protein (238aa)
Fructose ABC transporter, ATP-binding component FrcA n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q081_9PSEU
Fructose ABC transporter, ATP-binding component FrcA {ECO:0000313|EMBL:CEL15806.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
sugar ABC transporter ATPase
Displaying 23 items

View Taxonomy