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H1-18-all-fractions_k255_5779984

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_5779984_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000379A176
Transposase {ECO:0000313|EMBL:EWM15232.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase IS4 family protein
H1-18-all-fractions_k255_5779984_2
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(239..433)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000382DA0E
Uncharacterized protein {ECO:0000313|EMBL:EJJ05170.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
uncharacterized protein
H1-18-all-fractions_k255_5779984_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(480..800)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036BFC63
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK39936.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_5779984_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(958..1899)
DNA (942bp) protein (314aa)
NADPH:quinone reductase and related Zn-dependent oxidoreductase n=3 Tax=Amycolatopsis mediterranei RepID=D8I8E0_AMYMU
NADPH:quinone reductase and related Zn-dependent oxidoreductase
NADPH:quinone reductase and related Zn-dependent oxidoreductase {ECO:0000313|EMBL:AEK39937.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_5779984_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2094..2576
DNA (483bp) protein (161aa)
TetR family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003608F4A
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AEK39938.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_5779984_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2692..3042)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KDW2_SACES
Putative integral membrane protein {ECO:0000313|EMBL:CEL22261.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_5779984_7
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3187..3615)
DNA (429bp) protein (143aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HDM2_STRA9
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EXU85555.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
H1-18-all-fractions_k255_5779984_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3660..5057)
DNA (1398bp) protein (466aa)
Xylulokinase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2S2_THEBD
xylulokinase
Xylulokinase {ECO:0000313|EMBL:ADG86883.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
H1-18-all-fractions_k255_5779984_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5107..5967)
DNA (861bp) protein (287aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1K7_9PSEU
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EHR49800.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
sugar phosphate isomerase/epimerase
H1-18-all-fractions_k255_5779984_10
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6060..7064)
DNA (1005bp) protein (335aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Saccharomonospora glauca K62 RepID=I1CZN7_9PSEU
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EIE98161.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
sugar phosphate isomerase/epimerase
H1-18-all-fractions_k255_5779984_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7061..8449)
DNA (1389bp) protein (463aa)
phosphodiesterase n=1 Tax=Amycolatopsis alba RepID=UPI00036B07A8
phosphodiesterase
Uncharacterized protein {ECO:0000313|EMBL:EMD26360.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
H1-18-all-fractions_k255_5779984_12
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8446..9579)
DNA (1134bp) protein (378aa)
Xylose isomerase-like enzyme n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XCK4_9PSEU
Xylose isomerase-like enzyme {ECO:0000313|EMBL:EHR60219.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
xylose isomerase-like enzyme
H1-18-all-fractions_k255_5779984_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9576..10442)
DNA (867bp) protein (289aa)
Putative metal-dependent hydrolase with TIM-barrel fold n=1 Tax=Saccharomonospora glauca K62 RepID=I1CZN4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:CEL16683.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
putative metal-dependent hydrolase with TIM-barrel fold protein
H1-18-all-fractions_k255_5779984_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10439..11941)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036AD29D
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CEL16682.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Hypothetical protein
H1-18-all-fractions_k255_5779984_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11938..12786)
DNA (849bp) protein (283aa)
Puitative transferase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QI38_9PSEU
Puitative transferase {ECO:0000313|EMBL:CEL16681.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Conserved putative membrane protein
H1-18-all-fractions_k255_5779984_16
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12783..14339)
DNA (1557bp) protein (519aa)
Inositol-1-phosphate synthase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q321_9PSEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK57388.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_5779984_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14422..18921)
DNA (4500bp) protein (1500aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003735319
Cytochrome c551/c552 {ECO:0000313|EMBL:CEL16679.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
glucose/sorbosone dehydrogenase
H1-18-all-fractions_k255_5779984_18
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19152..20312)
DNA (1161bp) protein (387aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
xylose isomerase n=1 Tax=Streptomyces scabrisporus RepID=UPI00037FCB3F
H1-18-all-fractions_k255_5779984_19
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20309..21463)
DNA (1155bp) protein (385aa)
Putative dehydrogenase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1K0_9PSEU
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AJK57387.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_5779984_20
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21515..22564)
DNA (1050bp) protein (350aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D71
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDN21951.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
monosaccharide-binding protein
H1-18-all-fractions_k255_5779984_21
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22613..23626)
DNA (1014bp) protein (338aa)
sugar ABC transporter permease n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C85A2
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EHR49789.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
rbsC; sugar ABC transporter permease
H1-18-all-fractions_k255_5779984_22
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23688..25211)
DNA (1524bp) protein (508aa)
rbsA1; Ribose import ATP-binding protein RbsA 1 (EC:3.6.3.17)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003730B6C
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) {ECO:0000313|EMBL:CEL16675.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
H1-18-all-fractions_k255_5779984_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25208..26434)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000379E637
Xylose-responsive transcription regulator, ROK family {ECO:0000313|EMBL:CEL16674.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcriptional regulator, Rok family protein
H1-18-all-fractions_k255_5779984_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26986..28188)
DNA (1203bp) protein (401aa)
ROK family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628146
ROK family transcriptional regulator
ROK family transcriptional regulator {ECO:0000313|EMBL:AIJ22865.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_5779984_25
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28367..29692
DNA (1326bp) protein (442aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EWC60690.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EWC60690.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037BD917
dacC; D-alanyl-D-alanine carboxypeptidase
H1-18-all-fractions_k255_5779984_26
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29723..30736)
DNA (1014bp) protein (338aa)
trehalose-6-phosphate synthase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026275E0
ribonuclease
Ribonuclease {ECO:0000313|EMBL:AIJ20897.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_5779984_27
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30773..31792)
DNA (1020bp) protein (340aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
tryptophanyl-tRNA synthetase n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CC31F
H1-18-all-fractions_k255_5779984_28
unknown

Not on your lists

comp(31812..32111)
DNA (300bp) protein (100aa)

This feature has no annotations

H1-18-all-fractions_k255_5779984_29
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32249..32902)
DNA (654bp) protein (218aa)
phosphohydrolase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000370CA1A
Phosphohydrolase {ECO:0000313|EMBL:KJK46321.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
metal-dependent phosphohydrolase, HD region
H1-18-all-fractions_k255_5779984_30
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32948..33679
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037AA3E9
Uncharacterized protein {ECO:0000313|EMBL:CCH17899.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
metal-dependent hydrolase of the beta-lactamase superfamily III
Displaying items 1-30 of 53 in total

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