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H1-18-all-fractions_k255_141535

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_141535_1
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(40..540)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FW64_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK44560.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_141535_2
unknown

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comp(537..635)
DNA (99bp) protein (33aa)

This feature has no annotations

H1-18-all-fractions_k255_141535_3
unknown

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comp(645..941)
DNA (297bp) protein (99aa)

This feature has no annotations

H1-18-all-fractions_k255_141535_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(938..1849)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037D3B9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ23367.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_141535_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1930..3195
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255C4
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AIJ23359.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_141535_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3201..3650)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ23358.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_141535_7
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3767..4324
DNA (558bp) protein (186aa)
Putative membrane protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JS22_SACES
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH28307.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_141535_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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4317..5321
DNA (1005bp) protein (335aa)
RDD domain containing protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC64_NAKMY
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ACV81458.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
H1-18-all-fractions_k255_141535_9
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5384..6337)
DNA (954bp) protein (318aa)
Predicted transcriptional regulator n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZN4_SACVD
putative transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:ACU98263.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
H1-18-all-fractions_k255_141535_10
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6486..7106
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XN52_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR63219.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hypothetical protein
H1-18-all-fractions_k255_141535_11
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7454..8032
DNA (579bp) protein (193aa)
deaminase reductase n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00035DC87D
Deaminase/reductase {ECO:0000313|EMBL:KES06011.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
deaminase-reductase domain-containing protein
H1-18-all-fractions_k255_141535_12
unknown

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8738..8980
DNA (243bp) protein (81aa)

This feature has no annotations

H1-18-all-fractions_k255_141535_13
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8977..9900
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003706826
Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:EOD70396.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ApbE family lipoprotein
H1-18-all-fractions_k255_141535_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9897..10460
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036046B1
ferric reductase
Ferric reductase domain protein protein transmembrane component domain protein {ECO:0000313|EMBL:AEA23005.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
H1-18-all-fractions_k255_141535_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10457..11734
DNA (1278bp) protein (426aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:AEA23004.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEA23004.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037DABF9
H1-18-all-fractions_k255_141535_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11731..11928
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000368D31C
Uncharacterized protein {ECO:0000313|EMBL:EWC59684.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ferredoxin
H1-18-all-fractions_k255_141535_17
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11940..12473)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0L7_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50813.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
H1-18-all-fractions_k255_141535_18
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12759..13472)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RCA4_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:KJE24931.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
H1-18-all-fractions_k255_141535_19
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13489..13977)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X9H9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB95484.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
H1-18-all-fractions_k255_141535_20
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14072..14932
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003662594
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KJE23042.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
TetR family transcriptional regulator
Displaying 20 items

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