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H1-18-all-fractions_k255_2119079

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2119079_1
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(50..1432)
DNA (1383bp) protein (461aa)
DNA repair protein RadA n=1 Tax=Actinokineospora enzanensis RepID=UPI00036956F3
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
DNA repair RadA-like protein
H1-18-all-fractions_k255_2119079_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1464..2231)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036C1980
Uncharacterized protein {ECO:0000313|EMBL:EWM14454.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Conserved putative secreted protein
H1-18-all-fractions_k255_2119079_3
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2514..3005
DNA (492bp) protein (164aa)
CarD family transcriptional regulator n=1 Tax=Actinokineospora enzanensis RepID=UPI000378409B
CarD-like transcriptional regulator {ECO:0000313|EMBL:EWC62164.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
transcription regulator CarD
H1-18-all-fractions_k255_2119079_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3112..3693
DNA (582bp) protein (194aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036B065B
H1-18-all-fractions_k255_2119079_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3690..4157
DNA (468bp) protein (156aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036FE5B4
H1-18-all-fractions_k255_2119079_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4199..5584
DNA (1386bp) protein (462aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cysteinyl-tRNA synthetase n=1 Tax=Actinokineospora enzanensis RepID=UPI0003669853
cysS; cysteinyl-tRNA synthetase
H1-18-all-fractions_k255_2119079_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5589..6545
DNA (957bp) protein (319aa)
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB {ECO:0000313|EMBL:EWC62158.1}; EC=2.1.1.- {ECO:0000313|EMBL:EWC62158.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
putative tRNA/rRNA methyltransferase (EC:2.1.1.-)
rRNA methyltransferase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036556CD
H1-18-all-fractions_k255_2119079_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6591..8024
DNA (1434bp) protein (478aa)
Probable poly(Beta-D-mannuronate) O-acetylase {ECO:0000313|EMBL:CEL23323.1}; EC=2.3.1.- {ECO:0000313|EMBL:CEL23323.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Putative poly(Beta-D-mannuronate) O-acetylase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PGM6_9PSEU
alginate O-acetyltransferase
H1-18-all-fractions_k255_2119079_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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8617..10323
DNA (1707bp) protein (569aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAP4_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU74367.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-18-all-fractions_k255_2119079_10
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10447..11574
DNA (1128bp) protein (376aa)
XRE family transcriptional regulator n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SI75_AMYOR
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AGM03339.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
H1-18-all-fractions_k255_2119079_11
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11574..12134
DNA (561bp) protein (187aa)
Flavoprotein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3M0_FRASU
Flavoprotein {ECO:0000313|EMBL:KEI43360.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
flavoprotein
H1-18-all-fractions_k255_2119079_12
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12245..12529
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625642
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ21802.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_2119079_13
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12532..12993
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036EFA38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH94887.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_2119079_14
unknown

Not on your lists

13053..13301
DNA (249bp) protein (83aa)

This feature has no annotations

H1-18-all-fractions_k255_2119079_15
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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13388..13672
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=I7E5Q6_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KDN23308.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
H1-18-all-fractions_k255_2119079_16
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13669..14199
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000364A011
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AJK56341.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_2119079_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14615..16036
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000377E0E4
Transfer protein traSA {ECO:0000313|EMBL:CEL14017.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Cell division protein, FtsK/SpoIIIE family
H1-18-all-fractions_k255_2119079_18
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16033..16443
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UZ55_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CEL14018.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_2119079_19
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16440..18032
DNA (1593bp) protein (531aa)
replication initiator protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003609470
replication initiator protein
Replication initiator protein {ECO:0000313|EMBL:AJK57997.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_2119079_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18046..18231
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI0003690787
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH94247.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_2119079_21
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18234..19460
DNA (1227bp) protein (409aa)
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WMF0_ACTMD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACU34884.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_2119079_22
unknown

Not on your lists

comp(19742..20065)
DNA (324bp) protein (108aa)

This feature has no annotations

H1-18-all-fractions_k255_2119079_23
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20376..20771
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037B8B58
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB31048.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
H1-18-all-fractions_k255_2119079_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20760..21959)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036CC192
Uncharacterized protein {ECO:0000313|EMBL:EWC62152.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_2119079_25
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21973..22833)
DNA (861bp) protein (287aa)
Putative DNA-binding protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JSI3_STRHJ
putative DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:AEY87348.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
H1-18-all-fractions_k255_2119079_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22863..23678
DNA (816bp) protein (272aa)
oxidoreductase n=1 Tax=Streptomyces prunicolor RepID=UPI0003632E1F
Oxidoreductase {ECO:0000313|EMBL:ETK37670.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
aldo/keto reductase
H1-18-all-fractions_k255_2119079_27
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23675..24550)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000367270D
Zinc ABC transporter, inner membrane permease protein ZnuB {ECO:0000313|EMBL:EWC62151.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC-type Mn2+/Zn2+ transport system, permease component
H1-18-all-fractions_k255_2119079_28
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24551..25345)
DNA (795bp) protein (265aa)
ABC transporter related n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGK6_ACTMD
Zinc ABC transporter, ATP-binding protein ZnuC {ECO:0000313|EMBL:EWC62150.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC transporter
H1-18-all-fractions_k255_2119079_29
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25357..26226)
DNA (870bp) protein (290aa)
Periplasmic solute binding protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGK5_ACTMD
Zinc ABC transporter, periplasmic-binding protein ZnuA {ECO:0000313|EMBL:CEL23315.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
periplasmic solute binding protein
H1-18-all-fractions_k255_2119079_30
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26430..27518
DNA (1089bp) protein (363aa)
LacI family transcription regulator n=1 Tax=Actinokineospora enzanensis RepID=UPI000372E3ED
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EWC62148.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Transcriptional regulator, LacI family
Displaying items 1-30 of 41 in total

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