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H1-18-all-fractions_k255_2203322

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2203322_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66..1613)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035C8818
CONSERVED MEMBRANE PROTEIN {ECO:0000313|EMBL:CEL19234.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
glycosyl transferase
H1-18-all-fractions_k255_2203322_2
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1705..2538
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003797658
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
H1-18-all-fractions_k255_2203322_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2597..3580
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARD7_STRRD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACZ90277.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H1-18-all-fractions_k255_2203322_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3628..3939)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PN08_9ACTO
Antibiotic biosynthesis monooxygenase domain protein {ECO:0000313|EMBL:CEL18588.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_2203322_5
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3955..4779)
DNA (825bp) protein (275aa)
ABC-type multidrug transport system, permease component n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XM63_9PSEU
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
ABC-2 type transporter
H1-18-all-fractions_k255_2203322_6
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4776..5765)
DNA (990bp) protein (330aa)
Antibiotic transport system ATP-binding protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TH49_AMYOR
antibiotic transport system ATP-binding protein
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:AGM09628.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
H1-18-all-fractions_k255_2203322_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5840..6397)
DNA (558bp) protein (186aa)
TetR family transcriptional regulator n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A731
Transcriptional regulator {ECO:0000313|EMBL:EHR53276.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
TetR family transcriptional regulator
H1-18-all-fractions_k255_2203322_8
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6483..7580
DNA (1098bp) protein (366aa)
cytochrome P450 n=1 Tax=Streptomyces acidiscabies RepID=UPI000289DD50
Cytochrome P450 {ECO:0000313|EMBL:CQD07341.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
cytochrome P450
H1-18-all-fractions_k255_2203322_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7581..8213)
DNA (633bp) protein (211aa)
PadR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262764B
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIJ26081.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_2203322_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8273..10066
DNA (1794bp) protein (598aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
metG1; Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JNZ1_SACES
H1-18-all-fractions_k255_2203322_11
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10068..10925
DNA (858bp) protein (286aa)
tatD; deoxyribonuclease (EC:3.1.21.-)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035FB35E
DNAase {ECO:0000313|EMBL:EQD85144.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
H1-18-all-fractions_k255_2203322_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11188..12693
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000370DBD9
Cell wall-binding protein {ECO:0000313|EMBL:EWC58633.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
transglycosylase domain-containing protein
H1-18-all-fractions_k255_2203322_13
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12991..14211
DNA (1221bp) protein (407aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZI8_SACVD
dimethyladenosine transferase
H1-18-all-fractions_k255_2203322_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14544..15605
DNA (1062bp) protein (354aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000380D701
ABC-type transporter
H1-18-all-fractions_k255_2203322_15
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15674..16636
DNA (963bp) protein (321aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Actinokineospora enzanensis RepID=UPI0003758D51
H1-18-all-fractions_k255_2203322_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17002..17538)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F5P0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EWC59593.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_2203322_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17575..19344
DNA (1770bp) protein (590aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Actinokineospora enzanensis RepID=UPI000369E685
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CEL19219.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
ABC transporter
H1-18-all-fractions_k255_2203322_18
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19364..21037
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EWC60041.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EWC60041.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037E8E02
pks16; fatty-acyl-CoA synthase
H1-18-all-fractions_k255_2203322_19
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(21293..22858)
DNA (1566bp) protein (522aa)
Minus agglutinin n=2 Tax=Chlamydomonas reinhardtii RepID=Q6SSE8_CHLRE
Minus agglutinin {ECO:0000313|EMBL:AAS07042.1}; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="Chlamydomonas reinhardtii (Chlamydomonas smithii).;"
hypothetical protein
H1-18-all-fractions_k255_2203322_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22869..23450)
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
peptidyl-tRNA hydrolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237ABCF
H1-18-all-fractions_k255_2203322_21
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23507..24112)
DNA (606bp) protein (202aa)
50S ribosomal protein L25 n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JQS2_SACES
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_2203322_22
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24392..25372)
DNA (981bp) protein (327aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Actinokineospora enzanensis RepID=UPI00035D8C42
H1-18-all-fractions_k255_2203322_23
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25369..26775)
DNA (1407bp) protein (469aa)
Bifunctional protein glmU (EC:2.7.7.23)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035E84F1
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_2203322_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26992..28716)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037E89CF
Uncharacterized protein {ECO:0000313|EMBL:EWC62736.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
diguanylate cyclase
H1-18-all-fractions_k255_2203322_25
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29061..29192
DNA (132bp) protein (44aa)
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:ACU34623.1}; EC=1.14.19.1 {ECO:0000313|EMBL:ACU34623.1};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
Stearoyl-CoA 9-desaturase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJJ1_ACTMD
Displaying 25 items

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