ggKbase home page

H1-18-all-fractions_k255_2702657_2

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1455..2192)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 238.0
  • Bit_score: 368
  • Evalue 4.70e-99
RNA pseudouridine synthase n=1 Tax=Amycolatopsis methanolica RepID=UPI0003612CB2 similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 238.0
  • Bit_score: 357
  • Evalue 5.90e-96
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 247.0
  • Bit_score: 367
  • Evalue 2.70e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAACTCTGAACCGGAGGGCGTGCGCCTGCAGAAGGTGCTGTCCCGCGCCGGAGTCGCCTCGCGGCGCGCGGCCGAGGACCTCATCGCCCAGGGACGGGTCAAGGTCGACGGGGCCGTGGTCACCGAGTTCGGCCGGCGCGTCGACCCCGACCAGGCCGTCATCCACGTCGACGACGTGCGGGTCGTGGTCCGCGAGGACATGGTGTACCTCGCGTTCAACAAGCCGCGCGGCGTGCACACGACCATGTCCGACGACCGCGGCCGTCCCTGCGTCGGCGACTACATCCGCGGCCGCGACGAGCGCCTCTTCCACGTCGGCCGCCTCGACGCCGACACCGAGGGCCTGCTGCTCCTCACCAACGACGGCGACCTCGCGCACCGCCTGATGCACCCGTCCTTCACCGTCAACAAGACCTACCTCGCCGAGGTGCCGGGGCCGGTGCCCCGCGCGATCGGCCGCCGGCTCCGCGAGGGCATCGAACTCGAGGACGGCCCGGTCAGGGTCGACGCCTTCCGCGTCGTCGACACCAGCGGCGGCCGCGCGATGGTCGAGGTGGTGCTGCACGAGGGCCGCAACCACATCGTCCGCCGGCTCCTCGCCGCCGTCGACCTGCCGGTGCGCACGCTGGTTCGCACCCAGATCGGCAACGTGCACCTCGGCAACCAGCGGTCCGGCGCGATCCGCCCGCTGACCCGCCCGGAGGTCGGCTCGCTCTTCGCCGCGGTCGACCTCTGA
PROTEIN sequence
Length: 246
MNSEPEGVRLQKVLSRAGVASRRAAEDLIAQGRVKVDGAVVTEFGRRVDPDQAVIHVDDVRVVVREDMVYLAFNKPRGVHTTMSDDRGRPCVGDYIRGRDERLFHVGRLDADTEGLLLLTNDGDLAHRLMHPSFTVNKTYLAEVPGPVPRAIGRRLREGIELEDGPVRVDAFRVVDTSGGRAMVEVVLHEGRNHIVRRLLAAVDLPVRTLVRTQIGNVHLGNQRSGAIRPLTRPEVGSLFAAVDL*