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H1-18-all-fractions_k255_2702657

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_2702657_1
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(320..1453)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000370A7AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42703.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_2702657_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1455..2192)
DNA (738bp) protein (246aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
RNA pseudouridine synthase n=1 Tax=Amycolatopsis methanolica RepID=UPI0003612CB2
pseudouridine synthase Rsu
H1-18-all-fractions_k255_2702657_3
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2182..3009)
DNA (828bp) protein (276aa)
Segregation and condensation protein B n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FZ09_9PSEU
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; Flags: Fragment;; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
segregation and condensation protein B
H1-18-all-fractions_k255_2702657_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3006..3854)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000360CA6C
Segregation and condensation protein A {ECO:0000313|EMBL:EWM17277.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
chromosome segregation and condensation protein ScpA
H1-18-all-fractions_k255_2702657_5
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3844..4173)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KAF5_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH33804.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_2702657_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4170..5117)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035DABE3
Chromosome (Plasmid) partitioning protein ParA {ECO:0000313|EMBL:CEL23380.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_2702657_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5273..5659
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HSH2_9ACTO
Glyoxalase {ECO:0000313|EMBL:ETK34715.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
H1-18-all-fractions_k255_2702657_8
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5697..6677)
DNA (981bp) protein (327aa)
Putative pectate lyase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9D1_ACTM4
Pectate trisaccharide-lyase {ECO:0000313|EMBL:CQR60820.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
putative pectate lyase
H1-18-all-fractions_k255_2702657_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6776..7678)
DNA (903bp) protein (301aa)
tyrosine recombinase XerD n=1 Tax=Actinokineospora enzanensis RepID=UPI00037B9C0C
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_2702657_10
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7675..7884)
DNA (210bp) protein (70aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
Alanine dehydrogenase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0R3H1_9ACTO
putative L-alanine dehydrogenase
H1-18-all-fractions_k255_2702657_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7969..8457
DNA (489bp) protein (163aa)
TM2 domain containing protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2P045_9PSEU
TM2 domain containing protein {ECO:0000313|EMBL:EMD28344.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
TM2 domain-containing protein
H1-18-all-fractions_k255_2702657_12
unknown

Not on your lists

comp(8458..9387)
DNA (930bp) protein (310aa)

This feature has no annotations

H1-18-all-fractions_k255_2702657_13
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9492..10208)
DNA (717bp) protein (239aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5I7_9PSEU
Transcriptional regulator {ECO:0000313|EMBL:EHR50059.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
pdhR; GntR family transcriptional regulator
H1-18-all-fractions_k255_2702657_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10205..10969)
DNA (765bp) protein (255aa)
Short chain dehydrogenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBT6_9ACTO
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AGZ45465.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H1-18-all-fractions_k255_2702657_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10973..12337)
DNA (1365bp) protein (455aa)
Phenylacetaldehyde dehydrogenase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HSL7_9PSEU
Aldehyde dehydrogenase in hypothetical Actinobacterial gene cluster {ECO:0000313|EMBL:CEL23401.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
phenylacetaldehyde dehydrogenase
H1-18-all-fractions_k255_2702657_16
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12334..13095)
DNA (762bp) protein (254aa)
putative glutamine amidotransferase (EC:2.4.2.-)
Putative glutamine amidotransferase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K0A4_SACES
COG2071: predicted glutamine amidotransferases in hypothetical Actinobacterial gene cluster {ECO:0000313|EMBL:CEL23482.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
H1-18-all-fractions_k255_2702657_17
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13076..14440)
DNA (1365bp) protein (455aa)
Glutamine synthetase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5H9_9PSEU
Glutamine synthetase {ECO:0000313|EMBL:EHR50051.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
Hypothetical protein
H1-18-all-fractions_k255_2702657_18
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14595..16133
DNA (1539bp) protein (513aa)
amino acid permease n=1 Tax=Kribbella catacumbae RepID=UPI0003675836
Amino acid permease {ECO:0000313|EMBL:KJK47840.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
amino acid transporter
H1-18-all-fractions_k255_2702657_19
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16330..18234
DNA (1905bp) protein (635aa)
aromatic ring-opening dioxygenase LigA n=1 Tax=Streptomyces chartreusis RepID=UPI000262EE34
Aromatic ring-opening dioxygenase LigA {ECO:0000313|EMBL:KDN22385.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
G-D-S-L family lipolytic protein
H1-18-all-fractions_k255_2702657_20
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18742..19368)
DNA (627bp) protein (209aa)
ADP-ribose pyrophosphatase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T9P0_AMYOR
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AJK58713.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_2702657_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19365..21155)
DNA (1791bp) protein (597aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
CTP synthetase n=1 Tax=Actinokineospora enzanensis RepID=UPI00035D270C
hypothetical protein
H1-18-all-fractions_k255_2702657_22
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21233..22174)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036D81AD
Uncharacterized protein {ECO:0000313|EMBL:EWC60104.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_2702657_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22171..23355)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G8W0_9PSEU
FIG005773: conserved membrane protein ML1361 {ECO:0000313|EMBL:CEL23468.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_2702657_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23994..25772)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000362AC5A
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
DNA repair protein RecN
H1-18-all-fractions_k255_2702657_25
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25845..26738)
DNA (894bp) protein (298aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ppnK; putative inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000363BF03
H1-18-all-fractions_k255_2702657_26
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26735..27541)
DNA (807bp) protein (269aa)
cytochrome C peroxidase n=1 Tax=Actinokineospora enzanensis RepID=UPI000371EAFB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99800.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_2702657_27
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27545..27712)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037183BA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK44658.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_2702657_28
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27717..28589)
DNA (873bp) protein (291aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WA73_ACTMD
HAD superfamily hydrolase
HAD-superfamily hydrolase, subfamily IIA {ECO:0000313|EMBL:ACU39262.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_2702657_29
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28603..29127)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037BEDC2
TPR-repeat-containing protein {ECO:0000313|EMBL:CEL23461.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
Displaying 29 items

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