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H1-18-all-fractions_k255_4655099_1

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2..427

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 141.0
  • Bit_score: 253
  • Evalue 3.30e-65
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 148.0
  • Bit_score: 253
  • Evalue 9.60e-65
DNA-directed RNA polymerase subunit alpha n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4G0_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 141.0
  • Bit_score: 253
  • Evalue 1.20e-64

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Taxonomy

Prauserella sp. Am3 → Prauserella → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
AAGACGCTGGTCGAGCTGTTCGGCCTGGCGCGGGAACTGAACGTGGACGCCGAGGGGATCGAGATCGGTCCGTCGCCGCAGGAGGCGGACACCATCGCCGCCTACGCGATGCCGATCGAGGACCTCGACCTCACCGTGCGTTCGTACAACTGCCTCAAGCGTGAGGGCATCCACACCGTGGGTGAACTGGTTTCGCGCAGCGAGGCTGACCTGCTGGACATCCGCAACTTCGGCGCCAAGTCGATCGACGAGGTCAAGATGAAGCTCGTCGGTCTCGGCCTGGCGCTGAAGGACAGCCCGCCCGGGTTCGACCCGACCACCGCCGCCTCGGACTACGCGAGCGAAGGGTGGTCCTCGGACACCGGCGTCGGTGCGGACTCCAGCCACGATGACGGCCAGGACTACGCGGAGACGGAGCAGCTGTAA
PROTEIN sequence
Length: 142
KTLVELFGLARELNVDAEGIEIGPSPQEADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMKLVGLGLALKDSPPGFDPTTAASDYASEGWSSDTGVGADSSHDDGQDYAETEQL*