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H1-18-all-fractions_k255_4655099

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4655099_1
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..427
DNA (426bp) protein (142aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4G0_SACES
H1-18-all-fractions_k255_4655099_2
Amycolatopsis halophila, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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427..1164
DNA (738bp) protein (246aa)
50S ribosomal protein L17 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF8E
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=592678 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;"
50S ribosomal protein L17
H1-18-all-fractions_k255_4655099_3
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1293..1997
DNA (705bp) protein (235aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
tRNA-pseudouridine synthase I (EC:5.4.99.12)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036AD4AA
H1-18-all-fractions_k255_4655099_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2037..3593)
DNA (1557bp) protein (519aa)
Alkaline serine exoprotease A {ECO:0000313|EMBL:EWC63584.1}; EC=3.4.21.- {ECO:0000313|EMBL:EWC63584.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Subtilisin-like serine protease n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TGC6_AMYOR
subtilisin-like serine protease
H1-18-all-fractions_k255_4655099_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4712..5419)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000369ACE5
Uncharacterized protein {ECO:0000313|EMBL:EWC63585.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Hypothetical protein
H1-18-all-fractions_k255_4655099_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5462..5665)
DNA (204bp) protein (68aa)
type VII secretion protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037D4E91
Uncharacterized protein {ECO:0000313|EMBL:EWC63586.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
Displaying 6 items

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