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H1-18-all-fractions_k255_1243027

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1243027_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35..670)
DNA (636bp) protein (212aa)
transposase IS401 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00037DCCAC
integrase
Integrase {ECO:0000313|EMBL:AIJ23031.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_1243027_2
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(718..1008)
DNA (291bp) protein (97aa)
Transposase IS3/IS911 n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JC90_FRASC
transposase IS3/IS911
Transposase IS3/IS911 {ECO:0000313|EMBL:ABD11102.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
H1-18-all-fractions_k255_1243027_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1126..2628
DNA (1503bp) protein (501aa)
Pyruvate oxidase {ECO:0000313|EMBL:CEL17584.1}; EC=1.2.3.3 {ECO:0000313|EMBL:CEL17584.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
thiamine pyrophosphate protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626DE1
poxB; pyruvate dehydrogenase
H1-18-all-fractions_k255_1243027_4
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2715..2969
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IBQ3_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KGI70476.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
hypothetical protein
H1-18-all-fractions_k255_1243027_5
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3043..3411)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037A2188
Uncharacterized protein {ECO:0000313|EMBL:KGI80825.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
nitroreductase
H1-18-all-fractions_k255_1243027_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3468..6539)
DNA (3072bp) protein (1024aa)
Glycolate dehydrogenase , subunit GlcD {ECO:0000313|EMBL:CEL17598.1}; EC=1.1.99.14 {ECO:0000313|EMBL:CEL17598.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
D-lactate dehydrogenase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YC89_9PSEU
D-lactate dehydrogenase
H1-18-all-fractions_k255_1243027_7
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6634..7131)
DNA (498bp) protein (166aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X6K0_9PSEU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CEL17583.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
MarR family transcriptional regulator
H1-18-all-fractions_k255_1243027_8
unknown

Not on your lists

7341..7460
DNA (120bp) protein (40aa)

This feature has no annotations

H1-18-all-fractions_k255_1243027_9
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7588..9429
DNA (1842bp) protein (614aa)
Glycoside hydrolase 15-related protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YUW0_9PSEU
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:EME52488.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
glycoside hydrolase 15-related
H1-18-all-fractions_k255_1243027_10
unknown

Not on your lists

comp(9326..9673)
DNA (348bp) protein (116aa)

This feature has no annotations

H1-18-all-fractions_k255_1243027_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9683..10303)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037A31D6
Uncharacterized protein {ECO:0000313|EMBL:ETK34123.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
vitamin K epoxide reductase
H1-18-all-fractions_k255_1243027_12
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10303..11295)
DNA (993bp) protein (331aa)
Short chain dehydrogenase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YC94_9PSEU
Short chain dehydrogenase {ECO:0000313|EMBL:EME52487.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
short chain dehydrogenase
H1-18-all-fractions_k255_1243027_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11991..12365
DNA (375bp) protein (125aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F295_VERMA
O-acetylhomoserine/O-acetylserine sulfhydrylase
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:AEB42784.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
H1-18-all-fractions_k255_1243027_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12362..12844
DNA (483bp) protein (161aa)
CoA-binding protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036522A5
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACU75098.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-18-all-fractions_k255_1243027_15
unknown

Not on your lists

comp(12887..13060)
DNA (174bp) protein (58aa)

This feature has no annotations

H1-18-all-fractions_k255_1243027_16
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13156..14181)
DNA (1026bp) protein (342aa)
luciferase n=1 Tax=Streptomyces acidiscabies RepID=UPI000289C026
monooxygenase
Monooxygenase {ECO:0000313|EMBL:ADI08152.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
H1-18-all-fractions_k255_1243027_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15005..18790
DNA (3786bp) protein (1262aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000364AA6A
transcriptional activator domain-containing protein
Transcriptional activator domain protein {ECO:0000313|EMBL:ADB50832.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-18-all-fractions_k255_1243027_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18858..20264
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036A3D52
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB50831.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H1-18-all-fractions_k255_1243027_19
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

20274..20663
DNA (390bp) protein (130aa)
Type II secretion system protein E id=4880640 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
endoribonuclease L-PSP
Tax=GWC2_RIF_CHLX_73_18_curated
H1-18-all-fractions_k255_1243027_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21286..21618
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MVV2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98624.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
H1-18-all-fractions_k255_1243027_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21816..23357)
DNA (1542bp) protein (514aa)
Radical SAM domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIR2_PSEUX
Radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AEA22657.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
H1-18-all-fractions_k255_1243027_22
unknown

Not on your lists

comp(23354..24379)
DNA (1026bp) protein (342aa)

This feature has no annotations

H1-18-all-fractions_k255_1243027_23
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24513..25421)
DNA (909bp) protein (303aa)
Bll7673 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CX2_BRADU
calcium-binding protein
Calcium-binding protein {ECO:0000313|EMBL:AJK58009.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_1243027_24
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25373..25669)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HMG4_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ39403.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
H1-18-all-fractions_k255_1243027_25
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25720..26622)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S982_9CYAN
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AFY67197.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
H1-18-all-fractions_k255_1243027_26
unknown

Not on your lists

comp(26717..26818)
DNA (102bp) protein (34aa)

This feature has no annotations

H1-18-all-fractions_k255_1243027_27
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27837..28019)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000360C274
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66915.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
H1-18-all-fractions_k255_1243027_28
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28175..28579)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037AA573
Uncharacterized protein {ECO:0000313|EMBL:EOD69097.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
H1-18-all-fractions_k255_1243027_29
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28903..29568
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036B648E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGI66112.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
putative ABC transporter ATP-binding protein
H1-18-all-fractions_k255_1243027_30
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29565..30014
DNA (450bp) protein (150aa)
ABC transporter permease n=1 Tax=Streptomyces acidiscabies RepID=UPI000287C602
ABC transporter permease {ECO:0000313|EMBL:EST27320.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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