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H2-16-all-fractions_k255_1716293

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1716293_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..924
DNA (924bp) protein (308aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000377AAC8
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:GAO38818.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
methylmalonyl-CoA carboxyltransferase
H2-16-all-fractions_k255_1716293_2
unknown

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comp(921..1208)
DNA (288bp) protein (96aa)

This feature has no annotations

H2-16-all-fractions_k255_1716293_3
unknown

Not on your lists

1309..1671
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036700ED
H2-16-all-fractions_k255_1716293_4
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1671..2132
DNA (462bp) protein (154aa)
Predicted redox protein, regulator of disulfide bond formation n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SLY3_HAHCH
redox protein, regulator of disulfide bond formation
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:ABC28341.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
H2-16-all-fractions_k255_1716293_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2230..2643
DNA (414bp) protein (138aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
methylmalonyl-CoA epimerase n=1 Tax=Sphingomonas wittichii RepID=UPI0002ED5FB5
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKC26122.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
H2-16-all-fractions_k255_1716293_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2693..3457
DNA (765bp) protein (255aa)
Putative phosphoglycerate mutase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CRF5_9RHIZ
Phosphoglycerate mutase {ECO:0000313|EMBL:KJB96046.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative phosphoglycerate mutase
H2-16-all-fractions_k255_1716293_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3454..4311
DNA (858bp) protein (286aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y552_9RHIZ
carbohydrate kinase
H2-16-all-fractions_k255_1716293_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4308..5765)
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Pyruvate kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHN7_9SPHN
pyruvate kinase
H2-16-all-fractions_k255_1716293_9
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5864..6106
DNA (243bp) protein (81aa)
UPF0335 protein M529_13315 n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K514_9SPHN
UPF0335 protein M529_13315 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_10
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6116..6859
DNA (744bp) protein (248aa)
transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B424AA
Probable transcriptional regulatory protein WSK_0367 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6856..7341
DNA (486bp) protein (162aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
crossover junction endodeoxyribonuclease, partial n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB0CC
crossover junction endodeoxyribonuclease RuvC
H2-16-all-fractions_k255_1716293_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7354..7944
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5A0_9SPHN
ruvA; Holliday junction DNA helicase RuvA
H2-16-all-fractions_k255_1716293_13
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7941..8339
DNA (399bp) protein (133aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08MJ8_STIAD
Aldehyde-activating protein {ECO:0000313|EMBL:KJS25878.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
glutathione-dependent formaldehyde-activating protein
H2-16-all-fractions_k255_1716293_14
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8343..9440)
DNA (1098bp) protein (366aa)
Peptidase M19 family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S277_9SPHN
peptidase M19 family protein
Peptidase M19 family protein {ECO:0000313|EMBL:AGH50115.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1716293_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9536..10579
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J2M4_9SPHN
H2-16-all-fractions_k255_1716293_16
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10579..11742
DNA (1164bp) protein (388aa)
lysophospholipase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD6D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI66941.1}; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
H2-16-all-fractions_k255_1716293_17
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11708..11914)
DNA (207bp) protein (69aa)
Transcriptional regulator n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UJY3_9RHOB
Transcriptional regulator {ECO:0000313|EMBL:EAP88972.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
XRE family transcriptional regulator
H2-16-all-fractions_k255_1716293_18
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11907..12440)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KJV37290.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12546..13001
DNA (456bp) protein (152aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHQ4_9SPHN
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AGH50117.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1716293_20
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12998..14284
DNA (1287bp) protein (429aa)
Protein TolB n=1 Tax=Sphingomonas sp. S17 RepID=F3X1S6_9SPHN
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
tolB; translocation protein TolB
H2-16-all-fractions_k255_1716293_21
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14311..14730
DNA (420bp) protein (140aa)
peptidoglycan-binding protein n=1 Tax=Sphingomonas wittichii RepID=UPI00030C28CE
peptidoglycan-associated lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AHE51843.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
H2-16-all-fractions_k255_1716293_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14774..15079)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE8A
Uncharacterized protein {ECO:0000313|EMBL:GAO40514.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_23
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15158..15985)
DNA (828bp) protein (276aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
Pantothenate synthetase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2H6_9SPHN
pantothenate synthetase
H2-16-all-fractions_k255_1716293_24
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16029..16847
DNA (819bp) protein (273aa)
ATPase MipZ n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1U6_9SPHN
ATPase MipZ
ATPase MipZ {ECO:0000313|EMBL:AGH49950.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1716293_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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16876..18255
DNA (1380bp) protein (460aa)
Phosphoglucomutase/phosphomannomutase n=1 Tax=Sphingomonas paucimobilis RepID=Q9RP80_SPHPI
Phosphoglucomutase/phosphomannomutase {ECO:0000313|EMBL:AAF03690.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
phosphoglucomutase/phosphomannomutase
H2-16-all-fractions_k255_1716293_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18249..18584)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A43B2
Uncharacterized protein {ECO:0000313|EMBL:CDX62892.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_27
unknown

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comp(18720..19481)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000379F060
H2-16-all-fractions_k255_1716293_28
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19429..20670)
DNA (1242bp) protein (414aa)
apr; subtilisin domain protein (EC:3.4.21.62)
Subtilisin domain protein {ECO:0000313|EMBL:CDG82870.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CDG82870.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003670A47
H2-16-all-fractions_k255_1716293_29
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20667..21308)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003796683
Uncharacterized protein {ECO:0000313|EMBL:ELX09091.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H2-16-all-fractions_k255_1716293_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21319..21903)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000364011A
RNA polymerase sigma-E factor protein {ECO:0000313|EMBL:KGQ18252.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RNA polymerase sigma factor, sigma-70 family protein
Displaying items 1-30 of 46 in total

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