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H2-16-all-fractions_k255_2422422

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2422422_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..906
DNA (906bp) protein (302aa)
NAD(P) transhydrogenase beta subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3X3H8_9SPHN
PntB protein {ECO:0000313|EMBL:GAN14423.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
NAD synthetase
H2-16-all-fractions_k255_2422422_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..1740
DNA (717bp) protein (239aa)
Aspartate racemase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBM6_9SPHN
Aspartate racemase {ECO:0000313|EMBL:EAT08312.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
aspartate racemase
H2-16-all-fractions_k255_2422422_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1780..3726
DNA (1947bp) protein (649aa)
UvrABC system protein C n=2 Tax=Sphingomonas wittichii RepID=A5VEW3_SPHWW
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_2422422_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3723..4460
DNA (738bp) protein (246aa)
DNA repair protein RecO n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DCP2_SPHYA
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
recO; DNA repair protein RecO
H2-16-all-fractions_k255_2422422_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4471..4872
DNA (402bp) protein (134aa)
magnesium transporter ApaG n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037168CB
magnesium transporter ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_2422422_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4876..6012
DNA (1137bp) protein (379aa)
glycosyl transferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD4C
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGB47359.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
H2-16-all-fractions_k255_2422422_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6012..6791
DNA (780bp) protein (260aa)
serine/threonine protein phosphatase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289B1AB
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AGH48382.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2422422_8
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6864..7568
DNA (705bp) protein (235aa)
polysaccharide export protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD48
Uncharacterized protein {ECO:0000313|EMBL:KCZ47307.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
xanthan biosynthesis polysaccharide export protein GumB
H2-16-all-fractions_k255_2422422_9
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7601..9868
DNA (2268bp) protein (756aa)
capsular polysaccharide biosynthesis protein (EC:2.7.10.2)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003674305
Uncharacterized protein {ECO:0000313|EMBL:KCZ47308.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
H2-16-all-fractions_k255_2422422_10
unknown

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9894..11063
DNA (1170bp) protein (390aa)

This feature has no annotations

H2-16-all-fractions_k255_2422422_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11056..12414
DNA (1359bp) protein (453aa)
O-antigen polymerase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD4B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72828.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2422422_12
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

12436..12840
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BSX4_PSEFL
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
H2-16-all-fractions_k255_2422422_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(12775..13908)
DNA (1134bp) protein (378aa)
hypothetical protein id=14630920 bin=bin9_gal15 species=Hyphomicrobium sp. genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
family glycosyltransferase
Tax=CSP1_3_Armatimonadetes
H2-16-all-fractions_k255_2422422_14
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13985..14920)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5C381
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ADI15826.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
H2-16-all-fractions_k255_2422422_15
unknown

Not on your lists

comp(14904..15719)
DNA (816bp) protein (272aa)

This feature has no annotations

H2-16-all-fractions_k255_2422422_16
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15716..17452)
DNA (1737bp) protein (579aa)
Polysaccharide deacetylase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W093_9CYAN
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AFZ13626.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
H2-16-all-fractions_k255_2422422_17
Raphidiopsis brookii, Raphidiopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17478..18305)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Raphidiopsis brookii D9 RepID=D4TSW5_9NOST
Uncharacterized protein {ECO:0000313|EMBL:EFA72519.1}; TaxID=533247 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Raphidiopsis.;" source="Raphidiopsis brookii D9.;"
methyltransferase, FkbM family
H2-16-all-fractions_k255_2422422_18
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18435..18917)
DNA (483bp) protein (161aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5L5_SPHWW
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KKC23836.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
H2-16-all-fractions_k255_2422422_19
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19006..19683
DNA (678bp) protein (226aa)
uracil-DNA glycosylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035E0DD0
Putative uracil-DNA glycosylase {ECO:0000313|EMBL:GAO38890.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
uracil-DNA glycosylase superfamily protein
H2-16-all-fractions_k255_2422422_20
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19676..19963
DNA (288bp) protein (96aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC15125.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
H2-16-all-fractions_k255_2422422_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19960..20811)
DNA (852bp) protein (284aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S247_9SPHN
N-carbamoylputrescine amidase {ECO:0000313|EMBL:GAO38888.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
H2-16-all-fractions_k255_2422422_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20808..21782)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF00
agmatine deiminase
Agmatine deiminase {ECO:0000313|EMBL:AIT07099.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_2422422_23
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21852..22466)
DNA (615bp) protein (205aa)
UPI0003CFF23F related cluster n=1 Tax=unknown RepID=UPI0003CFF23F
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
rpsD; 30S ribosomal protein S4
H2-16-all-fractions_k255_2422422_24
unknown

Not on your lists

comp(22635..22874)
DNA (240bp) protein (80aa)

This feature has no annotations

H2-16-all-fractions_k255_2422422_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22953..23600)
DNA (648bp) protein (216aa)
rRNA methyltransferase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037ED55F
rRNA methyltransferase
rRNA methyltransferase {ECO:0000313|EMBL:AIT07104.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_2422422_26
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23669..24151)
DNA (483bp) protein (161aa)
Transcriptional repressor NrdR n=1 Tax=Sphingobium indicum B90A RepID=I5B8T7_9SPHN
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
nrdR; transcriptional regulator NrdR
H2-16-all-fractions_k255_2422422_27
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24164..25483)
DNA (1320bp) protein (440aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F3D
H2-16-all-fractions_k255_2422422_28
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25483..25929)
DNA (447bp) protein (149aa)
Ribose 5-phosphate isomerase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HRP5_9SPHN
RpiB/LacA/LacB family sugar-phosphate isomerase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_2422422_29
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26042..27364
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBY9_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KEZ79266.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
H2-16-all-fractions_k255_2422422_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27300..28088)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003640A44
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44217.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Displaying items 1-30 of 87 in total

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