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H2-16-all-fractions_k255_4652897

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4652897_1
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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3..1403
DNA (1401bp) protein (467aa)
AAA ATPase, central region n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEK8_9SPHN
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
clpB; chaperone protein ClpB
H2-16-all-fractions_k255_4652897_2
unknown

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comp(1448..1747)
DNA (300bp) protein (100aa)

This feature has no annotations

H2-16-all-fractions_k255_4652897_3
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1819..2100)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKF8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB13502.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
H2-16-all-fractions_k255_4652897_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..3749)
DNA (1506bp) protein (502aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB24_SPHWW
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ69490.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_4652897_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3746..4897)
DNA (1152bp) protein (384aa)
Aspartyl/asparaginyl beta-hydroxylase {ECO:0000313|EMBL:GAO54398.1}; EC=1.14.11.16 {ECO:0000313|EMBL:GAO54398.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FC32D8
aspartyl/asparaginyl beta-hydroxylase
H2-16-all-fractions_k255_4652897_6
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4901..6907)
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000360F13F
sulfotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
H2-16-all-fractions_k255_4652897_7
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7021..10449)
DNA (3429bp) protein (1143aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003114049
TonB-dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
H2-16-all-fractions_k255_4652897_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10653..11915)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59A4B
Uncharacterized protein {ECO:0000313|EMBL:GAO38138.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
TPR repeat protein
H2-16-all-fractions_k255_4652897_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12024..12953
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000311D63E
Putative oxidoreductase {ECO:0000313|EMBL:GAO38825.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Prolyl 4-hydroxylase alpha subunit
H2-16-all-fractions_k255_4652897_10

Not on your lists

comp(13020..16247)
DNA (3228bp) protein (1076aa)
TonB dependent receptor n=1 Tax=uncultured organism RepID=T1W9V2_9ZZZZ
TonB dependent receptor {ECO:0000313|EMBL:AGU11558.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
TonB-dependent receptor
H2-16-all-fractions_k255_4652897_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..17000
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IYG8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO40663.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_4652897_12
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16997..17209)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KBF7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB30793.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
H2-16-all-fractions_k255_4652897_13
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17214..18599)
DNA (1386bp) protein (462aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=2 Tax=Sphingomonas wittichii RepID=A5VB30_SPHWW
H2-16-all-fractions_k255_4652897_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18757..19857
DNA (1101bp) protein (367aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphoribosylamine--glycine ligase n=1 Tax=Sphingomonas wittichii RepID=UPI0002E851D8
phosphoribosylamine--glycine ligase
H2-16-all-fractions_k255_4652897_15
unknown

Not on your lists

19854..20348
DNA (495bp) protein (165aa)

This feature has no annotations

H2-16-all-fractions_k255_4652897_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20356..20844
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB32_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69498.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_4652897_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20841..22184)
DNA (1344bp) protein (448aa)
DNA-binding protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F03
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48858.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4652897_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22307..22963
DNA (657bp) protein (219aa)
OmpA/MotB n=1 Tax=Sphingomonas melonis RepID=UPI0003707A88
Membrane protein {ECO:0000313|EMBL:KHA63180.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
OmpA family protein
H2-16-all-fractions_k255_4652897_19
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(22960..23412)
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-adenosine deaminase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8R6_SPHWW
H2-16-all-fractions_k255_4652897_20
unknown

Not on your lists

comp(23456..23737)
DNA (282bp) protein (94aa)

This feature has no annotations

H2-16-all-fractions_k255_4652897_21
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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23933..24223
DNA (291bp) protein (97aa)
50S ribosomal protein L28 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL28_SPHAL
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
H2-16-all-fractions_k255_4652897_22
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24523..25116
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMR7_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54055.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
H2-16-all-fractions_k255_4652897_23
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25124..26938)
DNA (1815bp) protein (605aa)
cobalt chelatase large subunit (EC:6.6.1.2)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037C7CE9
Cobaltochelatase CobT subunit {ECO:0000313|EMBL:GAO40472.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_4652897_24
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26948..27526)
DNA (579bp) protein (193aa)
hydrogenobyrinic acid a,c-diamide cobaltochelatase (EC:6.6.1.2)
Hydrogenobyrinic acid a,c-diamide cobaltochelatase {ECO:0000313|EMBL:ABQ68690.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABQ68690.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Hydrogenobyrinic acid a,c-diamide cobaltochelatase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8S4_SPHWW
Displaying 24 items

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