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H2-16-all-fractions_k255_4674234

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4674234_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..821)
DNA (819bp) protein (273aa)
acyl-CoA dehydrogenase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002F0B3F2
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO40326.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
acyl-CoA dehydrogenase
H2-16-all-fractions_k255_4674234_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

867..1619
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S269_9SPHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGH49871.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4674234_3
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1616..2107)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQB9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJR22699.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
H2-16-all-fractions_k255_4674234_4
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2337..2957
DNA (621bp) protein (207aa)
D-galactonate transporter n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3Y4_9SPHN
D-galactonate transporter {ECO:0000313|EMBL:EGD60692.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
major facilitator superfamily protein
H2-16-all-fractions_k255_4674234_5
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2911..3645
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000382C156
D-galactonate transporter {ECO:0000313|EMBL:EGD57518.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
ttuB1; putative tartrate transporter TtuB
H2-16-all-fractions_k255_4674234_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3642..4601)
DNA (960bp) protein (320aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
pyridoxal-5'-phosphate-dependent protein subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
H2-16-all-fractions_k255_4674234_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4649..6670
DNA (2022bp) protein (674aa)
Phenylacetic acid degradation protein paaN n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V499_SPHWW
bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:ABQ67115.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_4674234_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6735..7163
DNA (429bp) protein (143aa)
CBS domain containing protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EL1_MESSB
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ABG64164.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
H2-16-all-fractions_k255_4674234_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7167..7670)
DNA (504bp) protein (168aa)
ATP synthase subunit B n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A02F
ATP synthase subunit b {ECO:0000313|EMBL:AKH41271.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
AtpF, ATP synthase F0, B subunit
H2-16-all-fractions_k255_4674234_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7663..8154)
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEV7_SPHWW
H+-transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_4674234_11
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8181..8414)
DNA (234bp) protein (78aa)
F0F1 ATP synthase subunit C n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C7B71
H+-transporting two-sector ATPase C
ATP synthase subunit C {ECO:0000313|EMBL:KKC27805.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
H2-16-all-fractions_k255_4674234_12
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8442..9218)
DNA (777bp) protein (259aa)
ATP synthase subunit a n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=ATP6_SPHAL
F0F1 ATP synthase subunit A
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
H2-16-all-fractions_k255_4674234_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9229..9564)
DNA (336bp) protein (112aa)
ATP synthase I n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A02B
ATP synthase I
ATP synthase I {ECO:0000313|EMBL:AJP71052.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_4674234_14
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9702..10058)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z3B8_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI97100.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
H2-16-all-fractions_k255_4674234_15
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10055..10264)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2CU95_9SPHN
YnbE-like lipoprotein {ECO:0000313|EMBL:KFG89626.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
H2-16-all-fractions_k255_4674234_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10273..13503)
DNA (3231bp) protein (1077aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A1C5B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06663.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
H2-16-all-fractions_k255_4674234_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13620..14315
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZ11_9SPHN
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AGH48950.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_4674234_18
unknown

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14380..14769
DNA (390bp) protein (130aa)

This feature has no annotations

H2-16-all-fractions_k255_4674234_19
unknown

Not on your lists

comp(14797..15336)
DNA (540bp) protein (180aa)

This feature has no annotations

H2-16-all-fractions_k255_4674234_20
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15576..16898
DNA (1323bp) protein (441aa)
Adenylosuccinate lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W197_9SPHN
adenylosuccinate lyase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_4674234_21
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16982..17842
DNA (861bp) protein (287aa)
bphP; phytochrome protein (EC:2.7.3.-)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003604472
Bacteriophytochrome (Light-regulated signal transduction histidine kinase) {ECO:0000313|EMBL:EJK86854.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
H2-16-all-fractions_k255_4674234_22
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17916..18236
DNA (321bp) protein (107aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GUN9_9CAUL
Putative transcriptional regulator {ECO:0000313|EMBL:EJL34145.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
putative transcriptional regulator
H2-16-all-fractions_k255_4674234_23
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18233..18703
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AHM0_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF00552.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
H2-16-all-fractions_k255_4674234_24
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18718..19368
DNA (651bp) protein (217aa)
glutathione S-transferase (EC:2.5.1.18)
Putative glutathione S-transferase GSTF2 (GST-II) {ECO:0000313|EMBL:ABQ37235.1}; EC=2.5.1.18 {ECO:0000313|EMBL:ABQ37235.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative glutathione S-transferase GSTF2 (GST-II) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EM41_BRASB
H2-16-all-fractions_k255_4674234_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19365..20483)
DNA (1119bp) protein (373aa)
molecular chaperone DnaJ n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035C68C6
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
molecular chaperone DnaJ
H2-16-all-fractions_k255_4674234_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20549..21103)
DNA (555bp) protein (185aa)
UPI0003D031AC related cluster n=1 Tax=unknown RepID=UPI0003D031AC
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
dnaK; molecular chaperone DnaK
Displaying 26 items

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