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H2-16-all-fractions_k255_8123076

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_8123076_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..500)
DNA (498bp) protein (166aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488ED9
clpA; Clp protease ClpX
Clp protease ClpX {ECO:0000313|EMBL:AJP72972.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_8123076_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(647..847)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA6DC
Uncharacterized protein {ECO:0000313|EMBL:GAO40375.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_8123076_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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915..1883
DNA (969bp) protein (323aa)
NAD(P)H quinone oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI000371515F
Sphingomonas taxi strain 30a NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26764.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
NAD(P)H-quinone oxidoreductase
H2-16-all-fractions_k255_8123076_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1884..3215)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GAQ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97721.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
H2-16-all-fractions_k255_8123076_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3314..3643)
DNA (330bp) protein (110aa)
Conserved hypothetical membrane protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D43_RHOPS
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ABE37996.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
H2-16-all-fractions_k255_8123076_6
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3640..4269)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VFQ7_9ENTR
Glycosyl transferase {ECO:0000313|EMBL:KGM09163.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
glycosyl transferase family protein
H2-16-all-fractions_k255_8123076_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4586..5317
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7A4E5_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN79464.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
H2-16-all-fractions_k255_8123076_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5426..6046
DNA (621bp) protein (207aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAK67976.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAK67976.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INJ7_9SPHN
gst; glutathione S-transferase
H2-16-all-fractions_k255_8123076_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6149..6853
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4509D
Uncharacterized protein {ECO:0000313|EMBL:GAO39147.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cytoplasmic protein
H2-16-all-fractions_k255_8123076_10
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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6898..7146
DNA (249bp) protein (83aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease 7 small subunit; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
exodeoxyribonuclease VII small subunit n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48B8A
exodeoxyribonuclease VII, small subunit
H2-16-all-fractions_k255_8123076_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7136..8050
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003797537
Polyprenyl synthetase {ECO:0000313|EMBL:ENY83104.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
polyprenyl synthetase
H2-16-all-fractions_k255_8123076_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8060..8551
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3X0L7_9SPHN
H2-16-all-fractions_k255_8123076_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8603..9202
DNA (600bp) protein (200aa)
Peptidylprolyl isomerase {ECO:0000313|EMBL:KHS49132.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KHS49132.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6T2_9SPHN
peptidylprolyl isomerase
H2-16-all-fractions_k255_8123076_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9218..10255
DNA (1038bp) protein (346aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:MF_00113}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=QUEA_SPHWW
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
H2-16-all-fractions_k255_8123076_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10252..11397
DNA (1146bp) protein (382aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
queuine tRNA-ribosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FEB
queuine tRNA-ribosyltransferase
H2-16-all-fractions_k255_8123076_16
unknown

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comp(11369..12973)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287C330
H2-16-all-fractions_k255_8123076_17
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12988..13620)
DNA (633bp) protein (211aa)
type 11 methyltransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288F032
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADW13880.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
H2-16-all-fractions_k255_8123076_18
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13617..14696)
DNA (1080bp) protein (360aa)
glycosyl transferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028987BC
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADW13881.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
H2-16-all-fractions_k255_8123076_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..15682)
DNA (906bp) protein (302aa)
Glutathione S-transferase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J1K6_9SPHN
S-transferase {ECO:0000313|EMBL:KGM34339.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glutathione S-transferase
H2-16-all-fractions_k255_8123076_20
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15773..16753)
DNA (981bp) protein (327aa)
DEAD/DEAH box helicase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E57
DEAD/DEAH box helicase {ECO:0000313|EMBL:KKC26383.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
DEAD/DEAH box helicase
Displaying 20 items

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