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H2-16-all-fractions_k255_8379358

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_8379358_1
unknown

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1..72
DNA (72bp) protein (24aa)
30S ribosomal protein S11
H2-16-all-fractions_k255_8379358_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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155..1225
DNA (1071bp) protein (357aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RPOA_SPHWW
H2-16-all-fractions_k255_8379358_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1515..4583
DNA (3069bp) protein (1023aa)
DNA or RNA helicase of superfamily II n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RK3_RHOP5
superfamily II DNA/RNA helicase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
H2-16-all-fractions_k255_8379358_4
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4948..6288
DNA (1341bp) protein (447aa)
Regulatory protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2J9_9RHIZ
Regulatory protein {ECO:0000313|EMBL:EAU42182.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation region
H2-16-all-fractions_k255_8379358_5
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6303..6830
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FG35_9PSED
Uncharacterized protein {ECO:0000313|EMBL:BAM13970.1}; TaxID=76885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. K-62.;"
hypothetical protein
H2-16-all-fractions_k255_8379358_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6776..7228)
DNA (453bp) protein (151aa)
Transcriptional regulator, MerR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PD66_9SPHN
MerR regulatory family protein {ECO:0000313|EMBL:KGB54990.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
MerR family transcriptional regulator
H2-16-all-fractions_k255_8379358_7
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7302..7697
DNA (396bp) protein (132aa)
Mercuric transporter MerT n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRY0_9PROT
Mercuric transport protein {ECO:0000313|EMBL:GAK33917.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
mercuric transporter MerT
H2-16-all-fractions_k255_8379358_8
Komagataeibacter medellinensis, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7712..8029
DNA (318bp) protein (106aa)
Heavy metal transport/detoxification protein n=3 Tax=Proteobacteria RepID=G2I8R2_GLUXN
merP; mercuric transport protein periplasmic binding protein MerP
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:BAK85312.1}; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
H2-16-all-fractions_k255_8379358_9
unknown

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8388..9359
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E328D4
hypothetical protein
H2-16-all-fractions_k255_8379358_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9356..9586
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3F83D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74470.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_8379358_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9818..12682)
DNA (2865bp) protein (955aa)
Peptidase M16 domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGH3_9SPHN
Peptidase M16 domain-containing protein {ECO:0000313|EMBL:ENY82551.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
peptidase, M16 family
H2-16-all-fractions_k255_8379358_12
unknown

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comp(12802..12957)
DNA (156bp) protein (52aa)

This feature has no annotations

H2-16-all-fractions_k255_8379358_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13109..14206)
DNA (1098bp) protein (366aa)
permease YjgP/YjgQ family protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A01F
permease YjgP/YjgQ family protein
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ABQ70251.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_8379358_14
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14203..15438)
DNA (1236bp) protein (412aa)
YjgP/YjgQ family permease n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036F5CD2
YjgP/YjgQ family permease
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_8379358_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15479..16606
DNA (1128bp) protein (376aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD82_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AHE55232.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
diacylglycerol kinase catalytic subunit
H2-16-all-fractions_k255_8379358_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16619..17479
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD99_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81688.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
H2-16-all-fractions_k255_8379358_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17436..19418)
DNA (1983bp) protein (661aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2A9_9SPHN
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AGH48619.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_8379358_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19486..20688)
DNA (1203bp) protein (401aa)
Serine palmitoyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR42_SPHAL
glycine C-acetyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
H2-16-all-fractions_k255_8379358_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20685..20927)
DNA (243bp) protein (81aa)
phosphopantetheine-binding protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000366B25B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48617.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_8379358_20

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comp(21007..22599)
DNA (1593bp) protein (531aa)
Alpha-L-arabinofuranosidase C-terminus n=1 Tax=uncultured organism RepID=T1W8T4_9ZZZZ
Alpha-L-arabinofuranosidase C-terminus {ECO:0000313|EMBL:AGU11412.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
alpha-N-arabinofuranosidase
H2-16-all-fractions_k255_8379358_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22596..23501)
DNA (906bp) protein (302aa)
epimerase n=1 Tax=Sphingomonas elodea RepID=UPI000263107D
epimerase
Epimerase {ECO:0000313|EMBL:AJP71342.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_8379358_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23498..24541)
DNA (1044bp) protein (348aa)
GTPase CgtA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6001A
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
obgE; GTPase CgtA
H2-16-all-fractions_k255_8379358_23
unknown

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24756..25313
DNA (558bp) protein (186aa)

This feature has no annotations

H2-16-all-fractions_k255_8379358_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25321..25650)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036DC9B1
Uncharacterized protein {ECO:0000313|EMBL:GAO37945.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
glyoxalase/bleomycin resistance protein/dioxygenase
H2-16-all-fractions_k255_8379358_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25662..26285)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HEB2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP74470.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
H2-16-all-fractions_k255_8379358_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26421..26597
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037ECF8D
Uncharacterized protein {ECO:0000313|EMBL:GAO39894.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_8379358_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26598..27053)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7N6_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO40001.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
H2-16-all-fractions_k255_8379358_28
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(27102..27689)
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036FD7F2
TetR family transcriptional regulator {ECO:0000313|EMBL:KIY10767.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
TetR family transcriptional regulator
H2-16-all-fractions_k255_8379358_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27718..28590
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488B07
FF domain-containing protein
FF domain-containing protein {ECO:0000313|EMBL:AGH51179.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_8379358_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28587..29141)
DNA (555bp) protein (185aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6L8_9SPHN
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ENY83152.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
N-acetyltransferase GCN5
Displaying items 1-30 of 53 in total

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