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H2-16-all-fractions_k255_8750725

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_8750725_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..299)
DNA (297bp) protein (99aa)
recombinase RecA n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EBF
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_8750725_2
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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937..1164
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TN08_THETC
Uncharacterized protein {ECO:0000313|EMBL:GAM97373.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
H2-16-all-fractions_k255_8750725_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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1166..2185
DNA (1020bp) protein (340aa)
heat shock protein DnaJ domain-containing protein; K05516 curved DNA-binding protein id=14628276 bin=bin8_Chloro species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
phage prohead protease, HK97 family/dnaJ domain protein
Tax=CSP1_4_Chloroflexi
H2-16-all-fractions_k255_8750725_4
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2185..2496
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVN0_9BACT
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
H2-16-all-fractions_k255_8750725_5
unknown

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2539..3351
DNA (813bp) protein (271aa)

This feature has no annotations

H2-16-all-fractions_k255_8750725_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3460..4116)
DNA (657bp) protein (219aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3U5_SPHWW
H2-16-all-fractions_k255_8750725_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4244..7120)
DNA (2877bp) protein (959aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000371BB73
TonB-dependent receptor {ECO:0000313|EMBL:KGB51797.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor
H2-16-all-fractions_k255_8750725_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7259..8191)
DNA (933bp) protein (311aa)
RfbJ protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000371DDB5
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AJP74460.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_8750725_9
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8229..9161)
DNA (933bp) protein (311aa)
Cupin 2 conserved barrel domain-containing protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AI36_BURGB
cupin
Cupin 2 conserved barrel domain-containing protein {ECO:0000313|EMBL:ACR31566.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
H2-16-all-fractions_k255_8750725_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9158..10759)
DNA (1602bp) protein (534aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
trigger factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B880
H2-16-all-fractions_k255_8750725_11
unknown

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10975..11148
DNA (174bp) protein (58aa)

This feature has no annotations

H2-16-all-fractions_k255_8750725_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11145..11777)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000368B4F9
Uncharacterized protein {ECO:0000313|EMBL:ENY80480.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
H2-16-all-fractions_k255_8750725_13
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11782..13005)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002E77A3D
Uncharacterized protein {ECO:0000313|EMBL:EQB11693.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
peptidase M48 Ste24p
H2-16-all-fractions_k255_8750725_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13005..13817)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003171407
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70992.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_8750725_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13893..15518)
DNA (1626bp) protein (542aa)
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924, ECO:0000313|EMBL:AJP72890.1}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
alkaline phosphatase n=1 Tax=Sphingobium xenophagum RepID=UPI00035D1377
alkaline phosphatase
H2-16-all-fractions_k255_8750725_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15619..16563)
DNA (945bp) protein (315aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S787_9SPHN
Displaying 16 items

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