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H2-16-all-fractions_k255_1850086

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1850086_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVU6_9BURK
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
H2-16-all-fractions_k255_1850086_2
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(636..1244)
DNA (609bp) protein (203aa)
Clp protease proteolytic subunit ClpP n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034980ED
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
H2-16-all-fractions_k255_1850086_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1450..2757)
DNA (1308bp) protein (436aa)
trigger factor n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BB842
tig; trigger factor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_1850086_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2977..6246)
DNA (3270bp) protein (1090aa)
Cation/multidrug efflux pump n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WII9_9BURK
Cation/multidrug efflux pump {ECO:0000313|EMBL:EHR71809.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
transmembrane drug efflux protein
H2-16-all-fractions_k255_1850086_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6254..7381)
DNA (1128bp) protein (376aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6H6_LEPCP
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB34812.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_1850086_6
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7544..8395
DNA (852bp) protein (284aa)
Dehydrosqualene synthase {ECO:0000313|EMBL:EWS55569.1}; EC=2.5.1.96 {ECO:0000313|EMBL:EWS55569.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Putative terpenoid synthase-related protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFB1_METPP
terpenoid synthase-like protein
H2-16-all-fractions_k255_1850086_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8392..9240
DNA (849bp) protein (283aa)
phytoene synthase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003734EE3
squalene synthase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_1850086_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9254..10579
DNA (1326bp) protein (442aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVV3_9BURK
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EGJ12471.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative dehydrogenase
H2-16-all-fractions_k255_1850086_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10660..11433
DNA (774bp) protein (258aa)
IclR family transcriptional regulator n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346E839
IclR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EHR71815.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_1850086_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11642..12520)
DNA (879bp) protein (293aa)
pbpG; D-alanyl-D-alanine endopeptidase, PbpG (EC:3.4.16.4)
D-alanyl-D-alanine endopeptidase, PbpG {ECO:0000313|EMBL:BAL96141.1}; EC=3.4.16.4 {ECO:0000313|EMBL:BAL96141.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
D-alanyl-D-alanine endopeptidase, PbpG n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT04_RUBGI
H2-16-all-fractions_k255_1850086_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13118..14821)
DNA (1704bp) protein (568aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
2-isopropylmalate synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0I4_RAMTT
leuA; alpha-IPM synthetase
H2-16-all-fractions_k255_1850086_12
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15075..15716)
DNA (642bp) protein (214aa)
lysine transporter LysE n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3315
lysE type translocator family protein
KY49.ctg7180000000025_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP13043.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
H2-16-all-fractions_k255_1850086_13
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15801..16742)
DNA (942bp) protein (314aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000347BE57
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KDB52418.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
H2-16-all-fractions_k255_1850086_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16772..17788)
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Ketol-acid reductoisomerase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=ILVC_METPP
H2-16-all-fractions_k255_1850086_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17926..18417)
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003498BD2
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EHR71820.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_1850086_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18596..20395)
DNA (1800bp) protein (600aa)
acetolactate synthase 3 catalytic subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHM2_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_1850086_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20733..21302
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT10_RUBGI
ECF subfamily RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:BAL96147.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_1850086_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21299..21748
DNA (450bp) protein (150aa)
membrane protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034CDEBC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71823.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_1850086_19
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21745..22578
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHM5_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS60602.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
H2-16-all-fractions_k255_1850086_20
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22575..23150
DNA (576bp) protein (192aa)
RDD domain-containing protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KV32_9BURK
RDD domain-containing protein {ECO:0000313|EMBL:EGI76370.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
RDD domain-containing protein
H2-16-all-fractions_k255_1850086_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23197..23775
DNA (579bp) protein (193aa)
LOG family protein PA4923 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B483F
TIGR00730 family protein {ECO:0000313|EMBL:EHR71827.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_1850086_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23788..24126)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVW7_9BURK
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EGJ12485.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glnB; nitrogen regulatory protein P-II GlnB
Displaying 22 items

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