ggKbase home page

H2-16-all-fractions_k255_4336007

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_4336007_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28..408)
DNA (381bp) protein (127aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFF3_ANADF
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABS27449.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
H2-16-all-fractions_k255_4336007_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(550..2094)
DNA (1545bp) protein (515aa)
uracil-DNA glycosylase n=1 Tax=Variovorax paradoxus RepID=UPI000371E69F
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32740.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
uracil-DNA glycosylase superfamily protein
H2-16-all-fractions_k255_4336007_3
unknown

Not on your lists

comp(2129..2290)
DNA (162bp) protein (54aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_4
unknown

Not on your lists

comp(2301..2390)
DNA (90bp) protein (30aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2402..3691)
DNA (1290bp) protein (430aa)
biotin synthase n=1 Tax=Variovorax paradoxus RepID=UPI000366D103
radical SAM protein
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32741.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
H2-16-all-fractions_k255_4336007_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3823..4335)
DNA (513bp) protein (171aa)
Transcriptional regulator MarR family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PNA3_9BURK
Transcriptional regulator MarR family {ECO:0000313|EMBL:ELX13069.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
MarR family transcriptional regulator
H2-16-all-fractions_k255_4336007_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4362..5102
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000367BC85
Siderophore-interacting protein {ECO:0000313|EMBL:ELX13070.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
siderophore-interacting FAD-binding domain protein
H2-16-all-fractions_k255_4336007_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5103..5927)
DNA (825bp) protein (275aa)
Putative transmembrane anti-sigma factor n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFA7_METNO
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACL55818.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
H2-16-all-fractions_k255_4336007_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5924..6502)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=2 Tax=Ralstonia RepID=E2SU52_9RALS
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
rpoE; rna polymerase sigma factor protein
H2-16-all-fractions_k255_4336007_10
unknown

Not on your lists

6604..6978
DNA (375bp) protein (125aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_11
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6972..7748
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003763A66
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIV93085.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
H2-16-all-fractions_k255_4336007_12
unknown

Not on your lists

comp(7755..7985)
DNA (231bp) protein (77aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_13
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8093..8596)
DNA (504bp) protein (168aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDE3_METS4
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:BAO30872.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
H2-16-all-fractions_k255_4336007_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8786..9340
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DDE80
putative RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:BAL96875.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_4336007_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9387..12101
DNA (2715bp) protein (905aa)
ppkA; serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030B4423
Tax=RBG_16_Anaeromyxobacter_69_14_curated
H2-16-all-fractions_k255_4336007_16
unknown

Not on your lists

12116..12490
DNA (375bp) protein (125aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12500..13465)
DNA (966bp) protein (322aa)
DeoR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYN7_9BURK
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:AFU48268.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
H2-16-all-fractions_k255_4336007_18
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13556..14335
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D373D
NIPSNAP
NIPSNAP {ECO:0000313|EMBL:AHY48152.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
H2-16-all-fractions_k255_4336007_19
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14319..14816
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RUB9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK86641.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
H2-16-all-fractions_k255_4336007_20
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14813..16000)
DNA (1188bp) protein (396aa)
Acyltransferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9E3_COLFT
acyltransferase family protein
Acyltransferase family protein {ECO:0000313|EMBL:AIY41185.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-16-all-fractions_k255_4336007_21
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16044..16589)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGA3_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK59994.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
H2-16-all-fractions_k255_4336007_22
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16589..17362)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J2SY65_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM72271.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
hypothetical protein
H2-16-all-fractions_k255_4336007_23
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17645..19165
DNA (1521bp) protein (507aa)
aldB; aldehyde dehydrogenase B (EC:1.2.1.-)
Aldehyde dehydrogenase B {ECO:0000313|EMBL:CAZ87229.1}; EC=1.2.1.- {ECO:0000313|EMBL:CAZ87229.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Aldehyde dehydrogenase B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRI8_THIA3
H2-16-all-fractions_k255_4336007_24
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19412..19807
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037322CB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI58067.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
H2-16-all-fractions_k255_4336007_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19823..20260
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DWV4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80600.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-16-all-fractions_k255_4336007_26
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20327..21025
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S157_9BURK
Methyltransferase {ECO:0000313|EMBL:KJK14493.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SAM-dependent methyltransferase
H2-16-all-fractions_k255_4336007_27
unknown

Not on your lists

21091..21303
DNA (213bp) protein (71aa)

This feature has no annotations

H2-16-all-fractions_k255_4336007_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21307..21864)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXA0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91841.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polyisoprenoid-binding protein
Displaying 28 items

View Taxonomy