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H2-16-all-fractions_k255_6703116

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_6703116_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..776
DNA (774bp) protein (258aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ATP synthase subunit alpha n=1 Tax=Variovorax sp. CF313 RepID=J3CTN1_9BURK
ATP synthase f1 subunit alpha
H2-16-all-fractions_k255_6703116_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

814..1698
DNA (885bp) protein (295aa)
atpG; ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVA9_9BURK
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
H2-16-all-fractions_k255_6703116_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1725..3137
DNA (1413bp) protein (471aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
F0F1 ATP synthase subunit beta n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DB0F8
F-ATPase subunit beta
H2-16-all-fractions_k255_6703116_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3223..3648
DNA (426bp) protein (142aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=ATPE_METPP
ATP synthase epsilon chain {ECO:0000255|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000255|HAMAP-Rule:MF_00530}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
H2-16-all-fractions_k255_6703116_5
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3821..4189
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJE5_9BURK
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
H2-16-all-fractions_k255_6703116_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4251..5249
DNA (999bp) protein (333aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I2H1_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:EIJ35689.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
mucin 17-like protein
H2-16-all-fractions_k255_6703116_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5304..6089
DNA (786bp) protein (262aa)
Putative polyphosphate kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKM9_RUBGI
putative polyphosphate kinase
Putative polyphosphate kinase {ECO:0000313|EMBL:BAL93566.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_6703116_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6134..7201
DNA (1068bp) protein (356aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
uroporphyrinogen decarboxylase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000345A0CE
H2-16-all-fractions_k255_6703116_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7568..9661
DNA (2094bp) protein (698aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
priA; primosomal protein N' (EC:3.6.4.-)
primosomal protein N'''' n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B683B7
H2-16-all-fractions_k255_6703116_10
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9748..9981
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Pseudomonas sp. HYS RepID=UPI000299FC0A
Uncharacterized protein {ECO:0000313|EMBL:CDF96687.1}; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
hypothetical protein
H2-16-all-fractions_k255_6703116_11
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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10013..10492
DNA (480bp) protein (160aa)
Histone acetyltransferase HPA10 n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H2C5_DEIGI
Histone acetyltransferase HPA10
Histone acetyltransferase HPA10 {ECO:0000313|EMBL:AFD27768.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
H2-16-all-fractions_k255_6703116_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10489..11271
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002891C39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG83556.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-16-all-fractions_k255_6703116_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11379..12062
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM44_RUBGI
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:BAL94081.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_6703116_14
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12059..13444
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Histidine kinase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7V2_LEPCP
histidine kinase
H2-16-all-fractions_k255_6703116_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13572..15128
DNA (1557bp) protein (519aa)
Protease Do n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRS8_9BURK
Protease Do {ECO:0000313|EMBL:EGJ11046.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative S1B family peptidase
H2-16-all-fractions_k255_6703116_16
unknown

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comp(15309..15512)
DNA (204bp) protein (68aa)
hypothetical protein
H2-16-all-fractions_k255_6703116_17
unknown

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comp(15753..16034)
DNA (282bp) protein (94aa)

This feature has no annotations

H2-16-all-fractions_k255_6703116_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16247..18340
DNA (2094bp) protein (698aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ATP-dependent DNA helicase Rep n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346A06C
UvrD/REP helicase
H2-16-all-fractions_k255_6703116_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18505..19200
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003650EDC
yhhn family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_6703116_20
unknown

Not on your lists

19197..19574
DNA (378bp) protein (126aa)

This feature has no annotations

H2-16-all-fractions_k255_6703116_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19603..20457)
DNA (855bp) protein (285aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKS9_RUBGI
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:BAL93616.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_6703116_22
unknown

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comp(20516..21049)
DNA (534bp) protein (178aa)

This feature has no annotations

H2-16-all-fractions_k255_6703116_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21107..22957)
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037DCA99
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_6703116_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23316..23525
DNA (210bp) protein (70aa)
hypothetical protein id=5083292 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
H2-16-all-fractions_k255_6703116_25
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23615..25102)
DNA (1488bp) protein (496aa)
Peptidase M20 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XW72_LEPCP
peptidase M20
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_6703116_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25277..25873)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034791C6
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACY17263.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
H2-16-all-fractions_k255_6703116_27
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25995..26426
DNA (432bp) protein (144aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CJZ5_SHEPW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACJ27698.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
H2-16-all-fractions_k255_6703116_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26417..27280)
DNA (864bp) protein (288aa)
alpha/beta hydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A652
alpha/beta hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_6703116_29
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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27385..27927
DNA (543bp) protein (181aa)
acetyltransferase n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00037E2EE3
Acetyltransferase {ECO:0000313|EMBL:ETK24805.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
acetyltransferase
Displaying 29 items

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