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H2-16-all-fractions_k255_7333254

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_7333254_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..922
DNA (921bp) protein (307aa)
Serine/threonine protein phosphatase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMV7_9BURK
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EHR70530.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
H2-16-all-fractions_k255_7333254_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1164..1892
DNA (729bp) protein (243aa)
Ribonuclease PH n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY25_9BURK
ribonuclease ph
Tax=GWA2_Curvibacter_64_110_curated
H2-16-all-fractions_k255_7333254_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1894..2529
DNA (636bp) protein (212aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
nucleoside-triphosphatase (EC:3.6.1.15)
nucleoside-triphosphate diphosphatase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A70B6
H2-16-all-fractions_k255_7333254_4
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2771..4075
DNA (1305bp) protein (435aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B4EF63
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:KDB51278.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
H2-16-all-fractions_k255_7333254_5
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4047..4775)
DNA (729bp) protein (243aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWG9_BURP8
RNA polymerase sigma factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACC75296.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
H2-16-all-fractions_k255_7333254_6
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4792..5139)
DNA (348bp) protein (116aa)
Blue (Type 1) copper domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1FZU4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGD90674.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
copper binding s, plastocyanin/azurin family protein
H2-16-all-fractions_k255_7333254_7
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5132..5662)
DNA (531bp) protein (177aa)
membrane protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003774C47
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG20012.1}; Flags: Precursor;; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
H2-16-all-fractions_k255_7333254_8
Pseudomonas sp. GM25, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5921..9409
DNA (3489bp) protein (1163aa)
Signal transduction histidine kinase n=1 Tax=Pseudomonas sp. GM25 RepID=J3F9I7_9PSED
Signal transduction histidine kinase {ECO:0000313|EMBL:EJM27982.1}; Flags: Precursor;; TaxID=1144327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM25.;"
multi-sensor hybrid histidine kinase
H2-16-all-fractions_k255_7333254_9
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9470..10294
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JJR5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA34138.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
chemotaxis protein CheR
H2-16-all-fractions_k255_7333254_10
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10296..10913
DNA (618bp) protein (206aa)
Putative chemotaxis protein-glutamate methylesterase CheB n=1 Tax=Variovorax paradoxus B4 RepID=T1XA91_VARPD
cheB1; putative chemotaxis protein-glutamate methylesterase CheB
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
H2-16-all-fractions_k255_7333254_11
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10910..12142
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HEN4_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM70126.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
response regulator receiver sensor signal transduction histidine kinase
H2-16-all-fractions_k255_7333254_12
Neisseria bacilliformis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12145..13146)
DNA (1002bp) protein (334aa)
Arginine ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Neisseria bacilliformis ATCC BAA-1200 RepID=F2BDP4_9NEIS
Arginine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EGF10450.1}; TaxID=888742 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria bacilliformis ATCC BAA-1200.;"
hypothetical protein
H2-16-all-fractions_k255_7333254_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13349..14050
DNA (702bp) protein (234aa)
Two-component response regulatory protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPY3_RUBGI
two-component response regulatory protein
Two-component response regulatory protein {ECO:0000313|EMBL:BAL95070.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
H2-16-all-fractions_k255_7333254_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14050..15429
DNA (1380bp) protein (460aa)
sensor protein (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Sensor protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPY4_RUBGI
H2-16-all-fractions_k255_7333254_15
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15426..16211)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0003725269
Methyltransferase type 11 {ECO:0000313|EMBL:KIF81372.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
type 11 methyltransferase
H2-16-all-fractions_k255_7333254_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16332..18107
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000360DEB8
Permease {ECO:0000313|EMBL:KIZ40377.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TrkA family protein
H2-16-all-fractions_k255_7333254_17
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18171..18419)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E0C3B9
Membrane protein {ECO:0000313|EMBL:KDV26266.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
hypothetical protein
H2-16-all-fractions_k255_7333254_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18721..19944)
DNA (1224bp) protein (408aa)
Transcriptional regulator/sugar kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTN8_9BURK
ROK family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_7333254_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19955..20755)
DNA (801bp) protein (267aa)
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVZ7_VARPE
ABC transporter
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16720.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
H2-16-all-fractions_k255_7333254_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20757..21761)
DNA (1005bp) protein (335aa)
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS20_VARPS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS19971.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
H2-16-all-fractions_k255_7333254_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21763..22764)
DNA (1002bp) protein (334aa)
sugar ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037F236B
putative ribose ABC transporter, ribose-binding protein
Putative ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:AGU50530.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
H2-16-all-fractions_k255_7333254_22
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22862..23296
DNA (435bp) protein (145aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXU2_LEPCP
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACB36411.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
H2-16-all-fractions_k255_7333254_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23293..23862)
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWX8_VARPE
GCN5-like N-acetyltransferaser
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU36523.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
H2-16-all-fractions_k255_7333254_24
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23859..25037)
DNA (1179bp) protein (393aa)
Putative methyltransferase n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YR24_9PROT
Putative methyltransferase {ECO:0000313|EMBL:ESS14117.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
methylase
H2-16-all-fractions_k255_7333254_25
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25388..26473)
DNA (1086bp) protein (362aa)
cheB; chemotaxis response regulator (EC:3.1.1.61)
chemotaxis protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000347AF01
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_7333254_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26502..27185)
DNA (684bp) protein (228aa)
chemotaxis protein CheD n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B0445
cheD; chemoreceptor glutamine deamidase CheD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_7333254_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27248..28093)
DNA (846bp) protein (282aa)
cheR; chemotaxis protein methyltransferase CheR (EC:2.1.1.80)
chemotaxis protein CheR n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003482133
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-16-all-fractions_k255_7333254_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28312..28503
DNA (192bp) protein (64aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMW4_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHR70537.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
diguanylate cyclase
Displaying 28 items

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