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H2-18-all-fractions_k255_3446667

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3446667_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(5..553)
DNA (549bp) protein (183aa)
50S ribosomal protein L10 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD62_THET1
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
H2-18-all-fractions_k255_3446667_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(687..1424)
DNA (738bp) protein (246aa)
50S ribosomal protein L1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES9_CONWI
50S ribosomal protein L1
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3446667_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1421..1852)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Patulibacter medicamentivorans RepID=H0EBX5_9ACTN
50S ribosomal protein L11
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3446667_4

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comp(1854..2384)
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKM05546.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NusG antitermination factor
H2-18-all-fractions_k255_3446667_5
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2387..2692)
DNA (306bp) protein (102aa)
Protein translocase subunit SecE n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1L0_DESAP
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
H2-18-all-fractions_k255_3446667_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2737..2898)
DNA (162bp) protein (54aa)
50S ribosomal protein L33 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES5_CONWI
50S ribosomal protein L33
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3446667_7
Streptomyces sp. DSM 21069, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3055..3450)
DNA (396bp) protein (132aa)
Putative lipoprotein n=1 Tax=Streptomyces sp. DSM 21069 RepID=C3VLV1_9ACTO
Putative lipoprotein {ECO:0000313|EMBL:ACO94453.1}; TaxID=639005 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. DSM 21069.;"
lipoprotein
H2-18-all-fractions_k255_3446667_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3447..3944)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF5_ANADF
Uncharacterized protein {ECO:0000313|EMBL:GAO01736.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
H2-18-all-fractions_k255_3446667_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3941..4183)
DNA (243bp) protein (81aa)
Putative transmembrane anti-sigma factor n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T5_FRASU
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ADP84588.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
H2-18-all-fractions_k255_3446667_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4180..4782)
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS27803.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
H2-18-all-fractions_k255_3446667_11
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4800..5798)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037EAED1
Lactonase, 7-bladed beta-propeller {ECO:0000313|EMBL:GAO01742.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
3-carboxymuconate cyclase
H2-18-all-fractions_k255_3446667_12
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5900..6622)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QC30_CATAD
Uncharacterized protein {ECO:0000313|EMBL:KJS52450.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
H2-18-all-fractions_k255_3446667_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6865..7710
DNA (846bp) protein (282aa)
MscS Mechanosensitive ion channel n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARW5_RUBXD
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABG05863.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H2-18-all-fractions_k255_3446667_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7756..8475)
DNA (720bp) protein (240aa)
Glycosyl transferase, family 2 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGC4_MOOTA id=5223613 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl transferase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
H2-18-all-fractions_k255_3446667_15
unknown

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comp(8472..8780)
DNA (309bp) protein (103aa)

This feature has no annotations

H2-18-all-fractions_k255_3446667_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(8956..10164)
DNA (1209bp) protein (403aa)
Putative type IV fimbrial assembly protein PilC n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYH8_9DELT
type II secretion system protein
Tax=RBG_16_Actinobacteria_64_13_curated
H2-18-all-fractions_k255_3446667_17
unknown

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10236..10781
DNA (546bp) protein (182aa)

This feature has no annotations

H2-18-all-fractions_k255_3446667_18
Exophiala oligosperma, Exophiala, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

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comp(10806..11633)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ophiostoma piceae (strain UAMH 11346) RepID=S3CUS9_OPHP1
Strain CBS 72588 unplaced genomic scaffold supercont1.14, whole genome shotgun sequence {ECO:0000313|EMBL:KIW37283.1}; TaxID=215243 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.;" source="Exophiala oligosperma.;"
guxA; cellulose 1,4-beta-cellobiosidase
H2-18-all-fractions_k255_3446667_19
unknown

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comp(11633..11836)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 19 items

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