ggKbase home page

H2-18-all-fractions_k255_3427637

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3427637_1
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..551
DNA (549bp) protein (183aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4L6_GEOLS
hopanoid biosynthesis associated radical SAM protein HpnH
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:ACD95952.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
H2-18-all-fractions_k255_3427637_2
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

533..1108
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Gluconobacter thailandicus RepID=M9LU27_GLUTH
Uncharacterized protein {ECO:0000313|EMBL:GAJ27559.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
H2-18-all-fractions_k255_3427637_3
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1105..2034
DNA (930bp) protein (310aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI0003485F29
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
H2-18-all-fractions_k255_3427637_4
unknown

Not on your lists

2031..2417
DNA (387bp) protein (129aa)

This feature has no annotations

H2-18-all-fractions_k255_3427637_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2445..3347
DNA (903bp) protein (301aa)
ornithine cyclodeaminase n=1 Tax=Streptomyces canus RepID=UPI0003607F59
alanine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
H2-18-all-fractions_k255_3427637_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3344..4432
DNA (1089bp) protein (363aa)
citrate (Si)-synthase (EC:2.3.3.1)
Citrate (Si)-synthase {ECO:0000313|EMBL:ADP85060.1}; EC=2.3.3.1 {ECO:0000313|EMBL:ADP85060.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Citrate (Si)-synthase n=1 Tax=Frankia sp. CN3 RepID=G6HJW2_9ACTO
H2-18-all-fractions_k255_3427637_7
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4435..4875
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00037B7715
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU54927.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
H2-18-all-fractions_k255_3427637_8
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4886..6454
DNA (1569bp) protein (523aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2D9_ACIFD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU54928.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
H2-18-all-fractions_k255_3427637_9
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6454..7476
DNA (1023bp) protein (341aa)
NmrA family protein n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NNE7_9ACTO
Reductase {ECO:0000313|EMBL:CQR65306.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
NmrA family protein
H2-18-all-fractions_k255_3427637_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7473..8633
DNA (1161bp) protein (387aa)
kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023I5_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H2-18-all-fractions_k255_3427637_11
unknown

Not on your lists

8661..10364
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035E8FC6
H2-18-all-fractions_k255_3427637_12
unknown

Not on your lists

comp(10361..10864)
DNA (504bp) protein (168aa)
hypothetical protein
H2-18-all-fractions_k255_3427637_13

Not on your lists

comp(10978..11688)
DNA (711bp) protein (237aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003626B28
H2-18-all-fractions_k255_3427637_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11742..12353)
DNA (612bp) protein (204aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3427637_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12350..12985)
DNA (636bp) protein (212aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA2_SPHTD
RNA polymerase, sigma-24 subunit, ECF subfamily
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3427637_16
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13009..13620)
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
superoxide dismutase n=1 Tax=Laceyella sacchari RepID=UPI0003B3893A
superoxide dismutase
H2-18-all-fractions_k255_3427637_17
candidate division Zixibacteria, Bacteria

Not on your lists

13677..14297
DNA (621bp) protein (207aa)
Uncharacterized protein id=1249857 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Uncharacterized protein {ECO:0000313|EMBL:EQB62720.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
Superoxide dismutase
H2-18-all-fractions_k255_3427637_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14312..14920
DNA (609bp) protein (203aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBV8_9FIRM
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3427637_19
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14925..18305)
DNA (3381bp) protein (1127aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000376E4A8
Peptidase S8/S53, subtilisin kexin sedolisin
Peptidase S8/S53, subtilisin kexin sedolisin {ECO:0000313|EMBL:CCH34436.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H2-18-all-fractions_k255_3427637_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18347..19315)
DNA (969bp) protein (323aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH9_CONWI
hypothetical protein
H2-18-all-fractions_k255_3427637_21
GWA1_OD1_44_9_plus, Azambacteria, Parcubacteria, Bacteria

Not on your lists

19333..19914
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B43A9F
Cache sensor signal transduction histidine kinase {ECO:0000313|EMBL:KKT82257.1}; TaxID=1618610 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA1_44_9.;"
ATP-binding region ATPase domain protein
H2-18-all-fractions_k255_3427637_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19917..20513)
DNA (597bp) protein (199aa)
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2X5_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3427637_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20555..20941)
DNA (387bp) protein (129aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ABG9_IGNH4
signal-transduction protein
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_3427637_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21134..21589)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000361EA27
Tax=RBG_16_Actinobacteria_67_10_curated
H2-18-all-fractions_k255_3427637_25
unknown

Not on your lists

21791..22714
DNA (924bp) protein (308aa)

This feature has no annotations

H2-18-all-fractions_k255_3427637_26
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22749..23642
DNA (894bp) protein (298aa)
GCN5-related N-acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PTJ2_KRIFD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB31305.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
H2-18-all-fractions_k255_3427637_27
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23667..24494)
DNA (828bp) protein (276aa)
DNA-formamidopyrimidine glycosylase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3E6V6_9ACTO
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:EMF28846.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
formamidopyrimidine-DNA glycosylase
H2-18-all-fractions_k255_3427637_28
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24555..25097)
DNA (543bp) protein (181aa)
hypothetical protein id=14426414 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
conserved hypothetical protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
H2-18-all-fractions_k255_3427637_29
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

25190..26083
DNA (894bp) protein (298aa)
L-asparaginase II n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RKG4_DEIPM
L-asparaginase II
L-asparaginase II {ECO:0000313|EMBL:ADY26743.1}; TaxID=693977 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
H2-18-all-fractions_k255_3427637_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

26224..27327
DNA (1104bp) protein (368aa)
RNA polymerase sigma factor SigA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH8_CONWI
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 125 in total

View Taxonomy