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H3-16-all-fractions_k255_3756229

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_3756229_1

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3..428
DNA (426bp) protein (142aa)
sugar isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A1A
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48842.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sugar isomerase
H3-16-all-fractions_k255_3756229_2

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410..1003
DNA (594bp) protein (198aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0V1_9BACT
histidinol-phosphate phosphatase
H3-16-all-fractions_k255_3756229_3

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1018..1743
DNA (726bp) protein (242aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Transaldolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUA7_9BACT
translaldolase
H3-16-all-fractions_k255_3756229_4
CG_Arma_02, Armatimonadetes, Bacteria

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comp(1738..2721)
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase id=14624688 bin=bin5_DeltaP species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=CG_Arma_02
H3-16-all-fractions_k255_3756229_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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2796..4781
DNA (1986bp) protein (662aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Cyanothece RepID=B7JVI6_CYAP8
short chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
H3-16-all-fractions_k255_3756229_6
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4784..5416)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00035CF1FB
Phosphoheptose isomerase {ECO:0000313|EMBL:KIL41290.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
sugar isomerase
H3-16-all-fractions_k255_3756229_7
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5425..6303)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000347A43B
Uncharacterized protein {ECO:0000313|EMBL:ELS34674.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
hypothetical protein
H3-16-all-fractions_k255_3756229_8
Kingella oralis, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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6324..6956
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744621
S1C family peptidase
Uncharacterized protein {ECO:0000313|EMBL:EEP67951.1}; TaxID=629741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella oralis ATCC 51147.;"
H3-16-all-fractions_k255_3756229_9
unknown

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7024..7326
DNA (303bp) protein (101aa)

This feature has no annotations

H3-16-all-fractions_k255_3756229_10
CG_Elusi_05, Elusimicrobia, Bacteria

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7451..7867
DNA (417bp) protein (139aa)
Tax=CG_Elusi_05
H3-16-all-fractions_k255_3756229_11
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7954..8202
DNA (249bp) protein (83aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWT6_9BURK
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
H3-16-all-fractions_k255_3756229_12
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(8280..8858)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DKI1_METS0
Uncharacterized protein {ECO:0000313|EMBL:GAN31968.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
H3-16-all-fractions_k255_3756229_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8932..10023)
DNA (1092bp) protein (364aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R3_9BACT
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EDY17121.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metal dependent phosphohydrolase
H3-16-all-fractions_k255_3756229_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(10079..10588)
DNA (510bp) protein (170aa)
sodC; copper/zinc superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase [Cu-Zn] n=2 Tax=Waddlia chondrophila RepID=D6YWS3_WADCW
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
H3-16-all-fractions_k255_3756229_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10628..11515)
DNA (888bp) protein (296aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D238_9BACT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EDY19278.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
H3-16-all-fractions_k255_3756229_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11615..12226)
DNA (612bp) protein (204aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK09_9BACT
peptidyl-prolyl cis-trans isomerase
H3-16-all-fractions_k255_3756229_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12291..15494)
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C82
carbamoyl-phosphate synthase large subunit
H3-16-all-fractions_k255_3756229_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15578..15907)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17835.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
H3-16-all-fractions_k255_3756229_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15911..16180)
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT
DNA-directed RNA polymerase subunit omega
H3-16-all-fractions_k255_3756229_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(16339..16794)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21831.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fe-S metabolism associated SufE
H3-16-all-fractions_k255_3756229_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16922..17785)
DNA (864bp) protein (288aa)
Rhodanese domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWP0_9BACT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sseA; Rhodanese-related sulfurtransferase
H3-16-all-fractions_k255_3756229_22

Not on your lists

17925..18596
DNA (672bp) protein (224aa)
DNA-binding heavy metal response regulator (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZYK7_9ZZZZ
DNA-binding heavy metal response regulator {ECO:0000313|EMBL:EQD49672.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two component heavy metal response transcriptional regulator
H3-16-all-fractions_k255_3756229_23
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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18577..19968
DNA (1392bp) protein (464aa)
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ITU1_9GAMM
sensor histidine kinase, HAMP domain-containing
Tax=GWC2_Geobacteraceae_58_44_curated
H3-16-all-fractions_k255_3756229_24
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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20187..21017
DNA (831bp) protein (277aa)
Aldo/keto reductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAM2_ANADF
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABS25768.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
H3-16-all-fractions_k255_3756229_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21176..21760
DNA (585bp) protein (195aa)
Chalcone isomerase, subgroup n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKL9_HALO1
Chalcone isomerase, subgroup
Chalcone isomerase, subgroup {ECO:0000313|EMBL:ACY15067.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
H3-16-all-fractions_k255_3756229_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(21847..22557)
DNA (711bp) protein (237aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H6_9BACT
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EDY18806.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 26 items

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