ggKbase home page

H3-16-all-fractions_k255_4597504

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4597504_1

Not on your lists

comp(292..705)
DNA (414bp) protein (138aa)
response regulator receiver protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B50
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver protein
H3-16-all-fractions_k255_4597504_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

842..1621
DNA (780bp) protein (260aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
Histidine kinase n=1 Tax=Burkholderia sp. H160 RepID=B5WE23_9BURK
his Kinase A domain protein
H3-16-all-fractions_k255_4597504_3
unknown

Not on your lists

1723..1929
DNA (207bp) protein (69aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_4
unknown

Not on your lists

comp(1993..2487)
DNA (495bp) protein (165aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2716..3774)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9R9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63287.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
H3-16-all-fractions_k255_4597504_6
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4239..4760
DNA (522bp) protein (174aa)
UPI0003CFEEF5 related cluster n=1 Tax=unknown RepID=UPI0003CFEEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY11284.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
H3-16-all-fractions_k255_4597504_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4784..5158
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58583.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
H3-16-all-fractions_k255_4597504_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5462..7327
DNA (1866bp) protein (622aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYQ8_OPITP
malto-oligosyltrehalose trehalohydrolase
H3-16-all-fractions_k255_4597504_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7342..8364)
DNA (1023bp) protein (341aa)
Predicted NADPH:quinone reductase (Alcohol dehydrogenase superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1R4_UNCMA
Putative NADPH:quinone reductase (Alcohol dehydrogenase superfamily) {ECO:0000313|EMBL:EYF08305.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
NADPH:quinone reductase
H3-16-all-fractions_k255_4597504_10
unknown

Not on your lists

8517..8696
DNA (180bp) protein (60aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_11
unknown

Not on your lists

8892..9026
DNA (135bp) protein (45aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_12
unknown

Not on your lists

9026..9256
DNA (231bp) protein (77aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_13
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9294..10034)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI0003680FE2
Uncharacterized protein {ECO:0000313|EMBL:KER09081.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
H3-16-all-fractions_k255_4597504_14
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10031..11188)
DNA (1158bp) protein (386aa)
Peptidase M42 family protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3G8_CYCMS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:AEL24607.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
H3-16-all-fractions_k255_4597504_15
unknown

Not on your lists

11332..11511
DNA (180bp) protein (60aa)

This feature has no annotations

H3-16-all-fractions_k255_4597504_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11606..15985
DNA (4380bp) protein (1460aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
histidine kinase n=1 Tax=Acidovorax avenae RepID=UPI0002D82A12
signal transduction histidine kinase with CheB and CheR activity
Displaying 16 items

View Taxonomy