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H3-16-all-fractions_k255_6633374

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6633374_1
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RMY0_MYCPH
H3-16-all-fractions_k255_6633374_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(244..1419)
DNA (1176bp) protein (392aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Putative Methionine gamma-lyase n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MRF8_9ACTO
Cystathionine gamma-synthase {ECO:0000313|EMBL:ETK36026.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
H3-16-all-fractions_k255_6633374_3
unknown

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comp(1412..1954)
DNA (543bp) protein (181aa)

This feature has no annotations

H3-16-all-fractions_k255_6633374_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1930..2622)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035F88DD
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACU76867.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H3-16-all-fractions_k255_6633374_5
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2650..3291
DNA (642bp) protein (214aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000255|HAMAP-Rule:MF_02114};; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=COFC_NOCFA
hypothetical protein
H3-16-all-fractions_k255_6633374_6
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3349..3567
DNA (219bp) protein (73aa)
cold shock protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI0003800F58
2-phospho-L-lactate guanylyltransferase {ECO:0000313|EMBL:KJY33187.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
H3-16-all-fractions_k255_6633374_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3625..4104)
DNA (480bp) protein (160aa)
Histone family protein DNA-binding protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q9T8_STANL
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADD44634.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
H3-16-all-fractions_k255_6633374_8
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4436..4876
DNA (441bp) protein (147aa)
MarR family transcriptional regulator id=12554322 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK87191.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
MarR family transcriptional regulator
H3-16-all-fractions_k255_6633374_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4920..5909
DNA (990bp) protein (330aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Methionine--tRNA ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIZ3_9CHLR
methionyl-tRNA synthetase
Displaying 9 items

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