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H3-16-all-fractions_k255_1740104

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_1740104_1
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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2..1417
DNA (1416bp) protein (472aa)
Cysteine--tRNA ligase id=3062639 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
cysS; cysteinyl-tRNA synthetase
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_1740104_2
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1424..2680)
DNA (1257bp) protein (419aa)
Diaminopimelate decarboxylase {ECO:0000256|RuleBase:RU003738}; EC=4.1.1.20 {ECO:0000256|RuleBase:RU003738};; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
Diaminopimelate decarboxylase n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RMP9_9DELT
lysA; putative diaminopimelate decarboxylase
H3-16-all-fractions_k255_1740104_3
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2677..3291)
DNA (615bp) protein (205aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=159743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae.;"
hypothetical protein n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002E98488
pyrE; orotate phosphoribosyltransferase
H3-16-all-fractions_k255_1740104_4
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3293..3991)
DNA (699bp) protein (233aa)
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25430.;"
UPI0003D6C4CE related cluster n=1 Tax=unknown RepID=UPI0003D6C4CE
H3-16-all-fractions_k255_1740104_5
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3988..7167)
DNA (3180bp) protein (1060aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus gaemokensis.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D8Q0_GEOSW
carB; carbamoyl phosphate synthase large subunit
H3-16-all-fractions_k255_1740104_6
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7170..8243)
DNA (1074bp) protein (358aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Bacillus nealsonii AAU1 RepID=R9CBS5_9BACI
protein PyrAA
H3-16-all-fractions_k255_1740104_7
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8246..9148)
DNA (903bp) protein (301aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Bacillus sp. SG-1 RepID=A6CPR4_9BACI
H3-16-all-fractions_k255_1740104_8
unknown

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comp(9120..9260)
DNA (141bp) protein (47aa)

This feature has no annotations

H3-16-all-fractions_k255_1740104_9
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9329..11326
DNA (1998bp) protein (666aa)
UvrABC system protein B n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T4V0_9DELT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
uvrB; UvrABC system protein B
H3-16-all-fractions_k255_1740104_10
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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11323..11673
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X3Q1_BACMS
hypothetical protein
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_1740104_11
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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11651..12796
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X3Q0_BACMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW26979.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_1740104_12
unknown

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comp(12800..13153)
DNA (354bp) protein (118aa)

This feature has no annotations

H3-16-all-fractions_k255_1740104_13
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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13432..14265
DNA (834bp) protein (278aa)
Putative flagellin protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RHP9_9DELT
fliC5; putative flagellin subunit
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_1740104_14
Agromyces sp. KY5R, Agromyces, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14328..15326
DNA (999bp) protein (333aa)
endo-type 6-aminohexanoate oligomer hydrolase n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629BD3
Endotype 6-aminohexanoat-oligomer hydrolase {ECO:0000313|EMBL:BAE95769.2}; TaxID=388924 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces.;" source="Agromyces sp. KY5R.;"
peptidase S58, DmpA
H3-16-all-fractions_k255_1740104_15
unknown

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comp(15316..15384)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 15 items

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