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H3-16-all-fractions_k255_4497354

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4497354_1
RIFOXYA1_FULL_Bacteriovorax_38_20_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1..1716
DNA (1716bp) protein (572aa)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0M9_BACMS
rpoC; DNA-directed RNA polymerase subunit beta'
Tax=RIFOXYA1_FULL_Bacteriovorax_38_20_curated
H3-16-all-fractions_k255_4497354_2
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


1797..2171
DNA (375bp) protein (125aa)
30S ribosomal protein S12 id=4804868 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
rpsL; 30S ribosomal protein S12
Tax=GWA2_Bdellovibrionales_49_15_curated
H3-16-all-fractions_k255_4497354_3
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


2184..2654
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=4804867 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
rpsG; 30S ribosomal protein S7
Tax=GWA2_Bdellovibrionales_49_15_curated
H3-16-all-fractions_k255_4497354_4
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

2727..4811
DNA (2085bp) protein (695aa)
Elongation factor G n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0M6_BACMS
fusA; elongation factor G (EF-G)
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_4497354_5
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


4906..5214
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0SMW3_9DELT
rpsJ; 30S ribosomal protein S10
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_4497354_6
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5298..5948
DNA (651bp) protein (217aa)
50S ribosomal protein L3 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RER7_9DELT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rplC; 50S ribosomal protein L3
H3-16-all-fractions_k255_4497354_7
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5961..6578
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RRR1_9DELT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rplD; 50S ribosomal protein L4
H3-16-all-fractions_k255_4497354_8
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6580..6870
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0M0_BACMS
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000313|EMBL:CBW28046.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_4497354_9
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6890..7714
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0L9_BACMS
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:CBW28045.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_4497354_10
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


7728..8039
DNA (312bp) protein (104aa)
30S ribosomal protein S19 id=3537004 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
rpsS; 30S ribosomal protein S19
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
H3-16-all-fractions_k255_4497354_11
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8043..8375
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0S0M0_9DELT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
rplV; 50S ribosomal protein L22
H3-16-all-fractions_k255_4497354_12
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8393..9019
DNA (627bp) protein (209aa)
30S ribosomal protein S3 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RPD5_9DELT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rpsC; 30S ribosomal protein S3
H3-16-all-fractions_k255_4497354_13
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9043..9489
DNA (447bp) protein (149aa)
50S ribosomal protein L16 n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RSH0_9DELT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
rplP; 50S ribosomal protein L16
H3-16-all-fractions_k255_4497354_14
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9513..9704
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RPD8_9DELT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rpmC; 50S ribosomal protein L29
H3-16-all-fractions_k255_4497354_15
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


9712..9969
DNA (258bp) protein (86aa)
30S ribosomal protein S17 id=4804855 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
rpsQ; putative 30S ribosomal protein S17
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_4497354_16
Bacteriovorax sp. BAL6_X, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9985..10353
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0DQV4_9DELT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1201290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BAL6_X.;"
rplN; putative 50S ribosomal protein L14
H3-16-all-fractions_k255_4497354_17
Planococcus sp. PAMC 21323, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10377..10691
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=2 Tax=Planococcus RepID=E7RKD3_9BACL
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1526927 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus sp. PAMC 21323.;"
H3-16-all-fractions_k255_4497354_18
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


10708..11250
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0R983_9DELT
rplE; 50S ribosomal protein L5
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_4497354_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11260..11565
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFF8_9BURK
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
H3-16-all-fractions_k255_4497354_20
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


11579..11962
DNA (384bp) protein (128aa)
30S ribosomal protein S8 id=4804850 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
rpsH; 30S ribosomal protein S8
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_4497354_21
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11976..12515
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0SUG4_9DELT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rplF; 50S ribosomal protein L6
H3-16-all-fractions_k255_4497354_22
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12525..12902
DNA (378bp) protein (126aa)
50S ribosomal protein L18 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RER1_9DELT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rplR; 50S ribosomal protein L18
H3-16-all-fractions_k255_4497354_23
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12914..13543
DNA (630bp) protein (210aa)
30S ribosomal protein S5 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RES3_9DELT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
rpsE; 30S ribosomal protein S5
H3-16-all-fractions_k255_4497354_24
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13552..13731
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0K4_BACMS
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_4497354_25
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13744..14199
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0S0M4_9DELT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
rplO; 50S ribosomal protein L15
H3-16-all-fractions_k255_4497354_26
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


14254..15576
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY id=2952788 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protein translocase subunit SecY/sec61 alpha
Tax=GWB1_Bdellovibrionales_55_8_curated
H3-16-all-fractions_k255_4497354_27
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15582..16217
DNA (636bp) protein (212aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
adk; putative adenylate kinase (ATP-AMP transphosphorylase) (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RSH9_9DELT
H3-16-all-fractions_k255_4497354_28
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

16290..16514
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T0U0_9DELT
infA; translation initiation factor IF-1
Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
H3-16-all-fractions_k255_4497354_29
Bacteriovorax sp. Seq25_V, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16646..17026
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0R8W7_9DELT
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1201288 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. Seq25_V.;"
H3-16-all-fractions_k255_4497354_30
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17046..17483
DNA (438bp) protein (146aa)
30S ribosomal protein S11 n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0J7_BACMS
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBW28023.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
Displaying items 1-30 of 32 in total

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