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H3-16-all-fractions_k255_5217807

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5217807_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..319
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F832_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91594.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
H3-16-all-fractions_k255_5217807_2
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359..1750)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
Asparagine--tRNA ligase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X1Z6_BACMS
asnS; asparaginyl-tRNA synthetase
H3-16-all-fractions_k255_5217807_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1750..2754)
DNA (1005bp) protein (335aa)
Ribokinase {ECO:0000313|EMBL:EOZ92435.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EOZ92435.1};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Ribokinase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D5U0_9BACT
sugar kinase
H3-16-all-fractions_k255_5217807_4
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2808..3500)
DNA (693bp) protein (231aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00037E73FC
hypothetical protein
H3-16-all-fractions_k255_5217807_5
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3630..6614
DNA (2985bp) protein (995aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
Glycine dehydrogenase (Decarboxylating) n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RGJ0_9DELT
gcvP; glycine dehydrogenase
H3-16-all-fractions_k255_5217807_6
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6606..7517)
DNA (912bp) protein (304aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
Sensory box histidine kinase n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YNE7_BDEBC
sensory box histidine kinase
H3-16-all-fractions_k255_5217807_7
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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7669..9270
DNA (1602bp) protein (534aa)
Peptide chain release factor 3 n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RWD3_9DELT
prfC; peptide chain release factor 3
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
H3-16-all-fractions_k255_5217807_8
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

9267..9758
DNA (492bp) protein (164aa)
Uncharacterized protein id=3354325 bin=GWA2_Elusimicrobia_66_18 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWC2_Elusimicrobia_65_9_curated
H3-16-all-fractions_k255_5217807_9
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

9856..10656
DNA (801bp) protein (267aa)
clcD; Carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase family protein id=5026726 bin=GWA2__Bacteriovorax-rel_49_15 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Tax=GWA2_Bdellovibrionales_49_15_curated
H3-16-all-fractions_k255_5217807_10
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10712..11587)
DNA (876bp) protein (292aa)
Peptidase, M48 domain protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T2G2_9DELT
Peptidase, M48 domain protein {ECO:0000313|EMBL:EQC49417.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
H3-16-all-fractions_k255_5217807_11
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11727..12593)
DNA (867bp) protein (289aa)
Peptidase, M48 domain protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T2G2_9DELT
Peptidase, M48 domain protein {ECO:0000313|EMBL:EQC49417.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
H3-16-all-fractions_k255_5217807_12
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12719..13606)
DNA (888bp) protein (296aa)
Peptidase, M48 domain protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T2G2_9DELT
Peptidase, M48 domain protein {ECO:0000313|EMBL:EQC49417.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
H3-16-all-fractions_k255_5217807_13
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13701..14543)
DNA (843bp) protein (281aa)
Peptidase, M48 domain protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T2G2_9DELT
Peptidase, M48 domain protein {ECO:0000313|EMBL:EQC49417.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
H3-16-all-fractions_k255_5217807_14
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14629..15516)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C1S3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM84018.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
permease
H3-16-all-fractions_k255_5217807_15
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15612..16676)
DNA (1065bp) protein (355aa)
Fructose-bisphosphate aldolase class 2 {ECO:0000313|EMBL:EKB50359.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EKB50359.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Fructose-bisphosphate aldolase class 2 n=1 Tax=Cecembia lonarensis LW9 RepID=K1M264_9BACT
fructose-bisphosphate aldolase, class II
H3-16-all-fractions_k255_5217807_16
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16742..17509
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0F8_9GAMM
hypothetical protein
H3-16-all-fractions_k255_5217807_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

17506..18912
DNA (1407bp) protein (469aa)
Transporter, DASS family n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RV56_9DELT
anion transporter
Tax=RBG_16_Zixibacteria_43_9_curated
H3-16-all-fractions_k255_5217807_18
unknown

Not on your lists

comp(18955..19635)
DNA (681bp) protein (227aa)

This feature has no annotations

H3-16-all-fractions_k255_5217807_19
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19721..20833)
DNA (1113bp) protein (371aa)
Membrane-bound lytic murein transglycosylase A family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F5R8_9DELT
MltA domain-containing protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
H3-16-all-fractions_k255_5217807_20
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20932..21450)
DNA (519bp) protein (173aa)
Putative acetyltransferase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X366_BACMS
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CBW26896.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5217807_21
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21435..22613)
DNA (1179bp) protein (393aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0R7H2_9DELT
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EQC46369.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
poly(A) polymerase
H3-16-all-fractions_k255_5217807_22
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22738..23670
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VCM6_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH95791.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio exovorus JSS.;"
Displaying 22 items

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