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H3-16-all-fractions_k255_5255743

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5255743_1
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..657
DNA (657bp) protein (219aa)
conjugation TrbI family protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7B
type IV secretion system protein B10
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
H3-16-all-fractions_k255_5255743_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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654..1652
DNA (999bp) protein (333aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7C
type VI secretion protein
Type VI secretion protein {ECO:0000313|EMBL:AJP70590.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H3-16-all-fractions_k255_5255743_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1807..2145
DNA (339bp) protein (113aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sulfate adenylyltransferase (EC:2.7.7.4)
sulfate adenylyltransferase subunit 2 n=1 Tax=Sphingomonas melonis RepID=UPI00037F6971
H3-16-all-fractions_k255_5255743_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2001..3146)
DNA (1146bp) protein (382aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Aldose 1-epimerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V2_SOLUE
H3-16-all-fractions_k255_5255743_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3210..4031)
DNA (822bp) protein (274aa)
RNAse III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000255|HAMAP-Rule:MF_00104}; EC=3.1.26.3 {ECO:0000255|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000255|HAMAP-Rule:MF_00104}; Short=RNase III {ECO:0000255|HAMAP-Rule:MF_00104};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CB4D0
H3-16-all-fractions_k255_5255743_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4045..4815)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003697F03
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82795.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5255743_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4812..6332)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370F852
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ82796.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5255743_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6425..6808
DNA (384bp) protein (128aa)
thioredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E511
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5255743_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6871..10173)
DNA (3303bp) protein (1101aa)
Patatin-related protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WHM0_9CYAN
patatin-related protein
Patatin-related protein {ECO:0000313|EMBL:AFZ19306.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
H3-16-all-fractions_k255_5255743_10
unknown

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10416..10616
DNA (201bp) protein (67aa)

This feature has no annotations

H3-16-all-fractions_k255_5255743_11
unknown

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10613..10897
DNA (285bp) protein (95aa)

This feature has no annotations

H3-16-all-fractions_k255_5255743_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10993..12297
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036900A3
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABJ81511.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_5255743_13
unknown

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12603..12959
DNA (357bp) protein (119aa)

This feature has no annotations

H3-16-all-fractions_k255_5255743_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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12907..13419
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E58E7
putative histidine kinase
Putative Histidine kinase {ECO:0000313|EMBL:CBK43653.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
H3-16-all-fractions_k255_5255743_15
Rhodococcus sp. DK17, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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13423..13587
DNA (165bp) protein (55aa)
bphS2; sensor kinase, two-component system (EC:2.7.-.-)
Sensor kinase, two-component system n=2 Tax=Rhodococcus RepID=Q0RWM1_RHOSR
Sensor kinase {ECO:0000313|EMBL:AAR90121.1}; TaxID=186196 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. DK17.;"
H3-16-all-fractions_k255_5255743_16
unknown

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comp(13720..13851)
DNA (132bp) protein (44aa)

This feature has no annotations

H3-16-all-fractions_k255_5255743_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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14460..14687
DNA (228bp) protein (76aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZ85_HERA2
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
H3-16-all-fractions_k255_5255743_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14704..15228)
DNA (525bp) protein (175aa)
Response regulator, LuxR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P820_9BACT
LuxR family response regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 18 items

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