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H3-16-all-fractions_k255_5479290

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5479290_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..308)
DNA (306bp) protein (102aa)
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAL84789.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
phosphate-binding protein; K02040 phosphate transport system substrate-binding protein id=12551960 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
phosphate binding protein
H3-16-all-fractions_k255_5479290_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

519..881
DNA (363bp) protein (121aa)
Protein CrcB homolog id=4140248 bin=GWC2_Bacteroidetes_40_22 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
H3-16-all-fractions_k255_5479290_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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956..1348
DNA (393bp) protein (131aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DSH4_9BACT
Phosphate regulon transcriptional regulatory protein PhoB (SphR) {ECO:0000313|EMBL:EPA00241.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
two component transcriptional regulator, winged helix family
H3-16-all-fractions_k255_5479290_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1311..1739)
DNA (429bp) protein (143aa)
Protein-tyrosine low molecular weight n=1 Tax=Nannochloropsis gaditana CCMP526 RepID=K8YTE7_9STRA
Protein tyrosine phosphatase {ECO:0000313|EMBL:KIC90926.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
protein-tyrosine phosphatase
H3-16-all-fractions_k255_5479290_5
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1763..2761)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000363EB2C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61048.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_5479290_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2886..3275)
DNA (390bp) protein (130aa)
histidine biosynthesis protein HisIE n=1 Tax=Xanthomonas RepID=UPI00026319BB
histidine biosynthesis protein HisIE
Histidine biosynthesis protein HisIE {ECO:0000313|EMBL:AJC44531.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
H3-16-all-fractions_k255_5479290_7
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3328..3630)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11NG7_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61046.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_5479290_8
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3730..4563)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=2141567 bin=GWD2_Bacteroidetes_33_33 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
metallophosphoesterase
Tax=GWD2_Bacteroidetes_33_33_curated
H3-16-all-fractions_k255_5479290_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4638..5318)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TLR6_MARTH
Two-component response regulator {ECO:0000313|EMBL:GAL82867.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
two component transcriptional regulator, winged helix family
H3-16-all-fractions_k255_5479290_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5326..6123)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036BB874
energy transducer TonB
TonB family protein {ECO:0000313|EMBL:CCH56897.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
H3-16-all-fractions_k255_5479290_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6125..6619)
DNA (495bp) protein (165aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LEF0_9BACT id=720855 bin=RAAC39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:GAL86803.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_5479290_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6682..7281)
DNA (600bp) protein (200aa)
Biopolymertransporter ExbD/TolR n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI96_9BACT
Biopolymer transporter {ECO:0000313|EMBL:GAL86804.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
biopolymer transporter ExbD
H3-16-all-fractions_k255_5479290_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7293..8138)
DNA (846bp) protein (282aa)
flagellar motor protein MotA n=1 Tax=Cytophaga aurantiaca RepID=UPI000380FF34
Flagellar motor protein MotA {ECO:0000313|EMBL:GAL86805.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
exbB; biopolymer transport protein
H3-16-all-fractions_k255_5479290_14
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8327..10126)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=2 Tax=Tannerella RepID=R7DE07_9PORP
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
H3-16-all-fractions_k255_5479290_15
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10295..12121)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=2 Tax=Tannerella RepID=R7DE07_9PORP
cell surface receptor IPT/TIG domain protein
Tax=GWA2_Bacteroidetes_31_9_curated
H3-16-all-fractions_k255_5479290_16
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12167..15022)
DNA (2856bp) protein (952aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL86910.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
TonB-dependent receptor id=4409714 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TonB-dependent receptor plug
H3-16-all-fractions_k255_5479290_17
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15238..18039)
DNA (2802bp) protein (934aa)
Uncharacterized protein id=4001965 bin=GWF2_Bacteroidetes_38_335 species=Thalassiosira oceanica genus=Thalassiosira taxon_order=unknown taxon_class=Coscinodiscophyceae phylum=Bacillariophyta tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
H3-16-all-fractions_k255_5479290_18
unknown

Not on your lists

18301..18432
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 18 items

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