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H3-16-all-fractions_k255_6382632

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6382632_1
unknown

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comp(3..413)
DNA (411bp) protein (137aa)

This feature has no annotations

H3-16-all-fractions_k255_6382632_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(744..1142)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A3C5_METMM
Conserved hypothetical secreted protein {ECO:0000313|EMBL:GAN32701.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
H3-16-all-fractions_k255_6382632_3
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1578..1997)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11RI6_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59978.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_6382632_4
unknown

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2097..2255
DNA (159bp) protein (53aa)

This feature has no annotations

H3-16-all-fractions_k255_6382632_5
unknown

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comp(2194..2718)
DNA (525bp) protein (175aa)

This feature has no annotations

H3-16-all-fractions_k255_6382632_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3522..5243
DNA (1722bp) protein (574aa)
DNA polymerase III, subunit gamma/tau n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXQ9_SOLCM
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:GAL82886.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
DNA polymerase III subunits gamma and tau
H3-16-all-fractions_k255_6382632_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5334..8375
DNA (3042bp) protein (1014aa)
Peptidase M16 domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMS0_RUNSL
Zinc protease {ECO:0000313|EMBL:GAL82885.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
peptidase M16 domain-containing protein
H3-16-all-fractions_k255_6382632_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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8536..9765
DNA (1230bp) protein (410aa)
icd; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHG5_9SPHI
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6382632_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9869..10270)
DNA (402bp) protein (134aa)
Two-component response regulator n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11QP5_CYTH3
Two-component response regulator {ECO:0000313|EMBL:GAL82882.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
two-component response regulator
H3-16-all-fractions_k255_6382632_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10267..13383)
DNA (3117bp) protein (1039aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
barA; PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000380F6ED
H3-16-all-fractions_k255_6382632_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13442..17221)
DNA (3780bp) protein (1260aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Response Regulator Receiver Signal Transduction Histidine Kinase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSZ4_9BACT
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
H3-16-all-fractions_k255_6382632_12
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17274..17753)
DNA (480bp) protein (160aa)
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EKB49292.1}; EC=4.2.2.- {ECO:0000313|EMBL:EKB49292.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Membrane-bound lytic murein transglycosylase D n=1 Tax=Cecembia lonarensis LW9 RepID=K1LAP9_9BACT
peptidoglycan-binding protein
Displaying 12 items

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