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H3-16-all-fractions_k255_7706879

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7706879_1

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3..323
DNA (321bp) protein (107aa)
3''''-5'''' exonuclease n=1 Tax=Psychroflexus tropicus RepID=UPI000367C81C
Uncharacterized protein {ECO:0000313|EMBL:KKO05142.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
H3-16-all-fractions_k255_7706879_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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480..2408
DNA (1929bp) protein (643aa)
ABC transporter ATP-binding protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003778792
ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAL87298.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
yliA; ABC transporter ATP-binding protein
H3-16-all-fractions_k255_7706879_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2413..4563
DNA (2151bp) protein (717aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
rnr; exoribonuclease II (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XW5_CYTH3
H3-16-all-fractions_k255_7706879_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4567..5544
DNA (978bp) protein (326aa)
isoprenyl synthetase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E8C76
isoprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:GAL87296.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_7706879_5
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5548..6303)
DNA (756bp) protein (252aa)
Methyltransferase domain family protein n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BKE8_9HELI
MCP methyltransferase, CheR-type
Tax=RBG_16_Deltaproteobacteria_50_11_curated
H3-16-all-fractions_k255_7706879_6
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(6296..7237)
DNA (942bp) protein (314aa)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EHP29005.1}; EC=2.4.1.- {ECO:0000313|EMBL:EHP29005.1};; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
Bactoprenol glucosyl transferase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BKF0_9HELI
family 2 glycosyl transferase
H3-16-all-fractions_k255_7706879_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7301..7900
DNA (600bp) protein (200aa)
Rhomboid family protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QSC8_SPILD
Protease {ECO:0000313|EMBL:GAL87295.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
rhomboid family protein
H3-16-all-fractions_k255_7706879_8
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8190..8453)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NMJ3_9BACT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
50S ribosomal protein L27
H3-16-all-fractions_k255_7706879_9
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8456..8764)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TS65_MARTH
50S ribosomal protein L21p
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
H3-16-all-fractions_k255_7706879_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9185..10165
DNA (981bp) protein (327aa)
nrdB; ribonucleoside-diphosphate reductase 1 subunit beta (EC:1.17.4.1)
ribonucleoside-diphosphate reductase n=1 Tax=Cytophaga aurantiaca RepID=UPI000382E125
Ribonucleoside-diphosphate reductase 1 subunit beta {ECO:0000313|EMBL:GAL87291.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_7706879_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10191..12173
DNA (1983bp) protein (661aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nrdA; ribonucleoside diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XX6_CYTH3
Displaying 11 items

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