ggKbase home page

H3-16-all-fractions_k255_7082316

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7082316_1
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(1..1755)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036E7BE0
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
H3-16-all-fractions_k255_7082316_2

Not on your lists

1863..2462
DNA (600bp) protein (200aa)
Intracellular protease, PfpI family n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UFY0_CYAP2
RibD C-terminal domain protein {ECO:0000313|EMBL:AIA17332.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pfpi family intracellular protease
H3-16-all-fractions_k255_7082316_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2627..3772)
DNA (1146bp) protein (382aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAA0_GEMAT
putative S9C family peptidase
Putative S9C family peptidase {ECO:0000313|EMBL:AHG89366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3965..5314)
DNA (1350bp) protein (450aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5331..8363)
DNA (3033bp) protein (1011aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_6
unknown

Not on your lists

comp(8685..9689)
DNA (1005bp) protein (335aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_7
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9689..11203)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:EKF06105.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
H3-16-all-fractions_k255_7082316_8
unknown

Not on your lists

11350..12468
DNA (1119bp) protein (373aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12472..13788
DNA (1317bp) protein (439aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90109.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13972..15816
DNA (1845bp) protein (615aa)
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
H3-16-all-fractions_k255_7082316_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15918..16694
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38249.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_7082316_12
unknown

Not on your lists

16691..17257
DNA (567bp) protein (189aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17331..18047
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG8_RHOM4
protein of unknown function DUF1080
Uncharacterized protein {ECO:0000313|EMBL:AHG88667.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18044..19321
DNA (1278bp) protein (426aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH0_RHOM4
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:AHG88666.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_15
unknown

Not on your lists

comp(19402..19857)
DNA (456bp) protein (152aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20177..21061)
DNA (885bp) protein (295aa)
transposase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FD9D31
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:AHG88076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_17

Not on your lists

comp(21058..21354)
DNA (297bp) protein (99aa)
Transposase of ISCARN46, ORFA, IS3 family IS3 group n=1 Tax=mine drainage metagenome RepID=E6PEQ3_9ZZZZ
Transposase of ISCARN46, ORFA, IS3 family IS3 group {ECO:0000313|EMBL:CBH74939.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transposase
H3-16-all-fractions_k255_7082316_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21500..24148)
DNA (2649bp) protein (883aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11
permease
Permease {ECO:0000313|EMBL:AHG89021.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24178..24510)
DNA (333bp) protein (111aa)
PadR family transcriptional regulator id=12557583 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PadR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
H3-16-all-fractions_k255_7082316_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24697..25383
DNA (687bp) protein (229aa)
UbiE/COQ5 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISN3_KORVE
UbiE/COQ5 methyltransferase
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:ABF40117.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H3-16-all-fractions_k255_7082316_21
unknown

Not on your lists

25656..25877
DNA (222bp) protein (74aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_22
unknown

Not on your lists

25834..26085
DNA (252bp) protein (84aa)
Putative phage tail fiber protein n=1 Tax=Celeribacter phage P12053L RepID=I6S6K3_9CAUD
H3-16-all-fractions_k255_7082316_23
unknown

Not on your lists

comp(26198..26944)
DNA (747bp) protein (249aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_24
unknown

Not on your lists

27636..27800
DNA (165bp) protein (55aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_25
unknown

Not on your lists

comp(27871..28320)
DNA (450bp) protein (150aa)

This feature has no annotations

H3-16-all-fractions_k255_7082316_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28438..29775
DNA (1338bp) protein (446aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA6_RHOMR
oxidoreductase domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
H3-16-all-fractions_k255_7082316_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30242..31492)
DNA (1251bp) protein (417aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT
putative oxidoreductase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
H3-16-all-fractions_k255_7082316_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(31534..32139)
DNA (606bp) protein (202aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZK5_SALRD
Tat pathway signal sequence domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
H3-16-all-fractions_k255_7082316_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32152..33822)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A9_GEMAT
GMC oxidoreductase
GMC oxidoreductase {ECO:0000313|EMBL:AHG88672.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_7082316_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(33833..34702)
DNA (870bp) protein (290aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG88673.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 146 in total

View Taxonomy