ggKbase home page

H3-16-all-fractions_k255_8812791

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_8812791_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN8_9BACT
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EEF58937.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphotransferase system, phosphocarrier protein HPr
H3-16-all-fractions_k255_8812791_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(262..1209)
DNA (948bp) protein (316aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
HPr kinase/phosphorylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN7_9BACT
HPr kinase
H3-16-all-fractions_k255_8812791_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1379..2143)
DNA (765bp) protein (255aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN6_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF58935.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
H3-16-all-fractions_k255_8812791_4
unknown

Not on your lists

comp(2140..2742)
DNA (603bp) protein (201aa)

This feature has no annotations

H3-16-all-fractions_k255_8812791_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2766..3254)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58934.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
H3-16-all-fractions_k255_8812791_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3244..3780)
DNA (537bp) protein (179aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN4_9BACT
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:EEF58933.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
H3-16-all-fractions_k255_8812791_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3862..4677)
DNA (816bp) protein (272aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN3_9BACT
H3-16-all-fractions_k255_8812791_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4905..5360
DNA (456bp) protein (152aa)
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN2_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EEF58931.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
H3-16-all-fractions_k255_8812791_9
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5474..6313
DNA (840bp) protein (280aa)
aminopeptidase n=1 Tax=Herbaspirillum lusitanum RepID=UPI000302C1A4
Uncharacterized protein {ECO:0000313|EMBL:KGM43124.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein
Displaying 9 items

View Taxonomy