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H3-16-all-fractions_k255_5356117

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5356117_1
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..721
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036808F1
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:CCG98331.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
H3-16-all-fractions_k255_5356117_2
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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738..2108
DNA (1371bp) protein (457aa)
RagB/SusD domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2H7_9BACT
RagB/SusD domain protein
RagB/SusD domain protein {ECO:0000313|EMBL:CCG98330.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
H3-16-all-fractions_k255_5356117_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2154..3704)
DNA (1551bp) protein (517aa)
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG
Ribonuclease G {ECO:0000313|EMBL:KIC96052.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ribonuclease, Rne/Rng family
H3-16-all-fractions_k255_5356117_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3981..4835)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C547A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17933.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_5356117_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4861..5151)
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT8_NIAKG
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AEW02023.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5356117_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5248..6336
DNA (1089bp) protein (363aa)
A/G-specific adenine glycosylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL91_CHIPD
A/G-specific adenine glycosylase
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACU58435.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
H3-16-all-fractions_k255_5356117_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6431..6868
DNA (438bp) protein (146aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT5_NIAKG
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
single-strand binding protein
H3-16-all-fractions_k255_5356117_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6951..8300
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365DF92
protein involved in gliding motility GldE
Protein involved in gliding motility GldE {ECO:0000313|EMBL:AHF16414.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_5356117_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8290..8874
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003744D1C
Uncharacterized protein {ECO:0000313|EMBL:KIC89708.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
H3-16-all-fractions_k255_5356117_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9100..9690
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20
Uncharacterized protein {ECO:0000313|EMBL:KIC89705.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
H3-16-all-fractions_k255_5356117_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9690..11069
DNA (1380bp) protein (460aa)
iron-sulfur cluster binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037061D2
[Fe-S]-binding protein {ECO:0000313|EMBL:KIC89704.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
iron-sulfur cluster binding protein
H3-16-all-fractions_k255_5356117_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11066..12403
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360617F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02015.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5356117_13

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comp(12475..13476)
DNA (1002bp) protein (334aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FN80_9FLAO
EamA-like transporter family {ECO:0000313|EMBL:AIA17061.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative drug/metabolite-transporting permease
H3-16-all-fractions_k255_5356117_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13549..15114)
DNA (1566bp) protein (522aa)
Phosphoribosylaminoimidazolecarboxamideformyltra nsferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQB1_9SPHI
phosphoribosylaminoimidazolecarboxamide formyltransferase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_5356117_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15196..17250)
DNA (2055bp) protein (685aa)
ComEC/Rec2-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQB0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17737.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_5356117_16
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17298..18482)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein id=2077072 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
H3-16-all-fractions_k255_5356117_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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18728..19753
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF3_9SPHI
cell shape-determining protein MreB
Cell shape-determining protein MreB {ECO:0000313|EMBL:AHF15717.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_5356117_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19842..20720
DNA (879bp) protein (293aa)
Rod shape-determining protein MreC n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF2_9SPHI
rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:AEW03095.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5356117_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20717..21250
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS5_NIAKG
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AEW03096.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5356117_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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21487..23580
DNA (2094bp) protein (698aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEW03097.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEW03097.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidoglycan glycosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS6_NIAKG
peptidoglycan glycosyltransferase
H3-16-all-fractions_k255_5356117_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23577..24902
DNA (1326bp) protein (442aa)
cell cycle protein n=1 Tax=Niabella aurantiaca RepID=UPI0003701662
Putative rod shape-determining protein {ECO:0000313|EMBL:GAO45100.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cell cycle protein
Displaying 21 items

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