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H3-16-all-fractions_k255_5544639

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5544639_1
unknown

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2..244
DNA (243bp) protein (81aa)

This feature has no annotations

H3-16-all-fractions_k255_5544639_2
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(287..766)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3U5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU21331.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
H3-16-all-fractions_k255_5544639_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(799..1539)
DNA (741bp) protein (247aa)
DNA glycosylase/AP lyase, H2TH DNA-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIF0_CHIPD
DNA glycosylase/AP lyase
DNA glycosylase/AP lyase, H2TH DNA-binding {ECO:0000313|EMBL:ACU63712.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
H3-16-all-fractions_k255_5544639_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1705..2988)
DNA (1284bp) protein (428aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEW02948.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEW02948.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA-directed DNA polymerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG
DNA-directed DNA polymerase
H3-16-all-fractions_k255_5544639_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2985..3416)
DNA (432bp) protein (144aa)
SOS response UmuD protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG
Peptidase S24 {ECO:0000313|EMBL:KIC92240.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SOS response UmuD protein
H3-16-all-fractions_k255_5544639_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3483..4070
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644DC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02950.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5544639_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4117..4701)
DNA (585bp) protein (195aa)
Intracellular protease, PfpI family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRC5_NIAKG
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:AEW00047.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_5544639_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4892..5689
DNA (798bp) protein (266aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRR2_CHIPD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:GAO45263.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
H3-16-all-fractions_k255_5544639_9
unknown

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5797..6165
DNA (369bp) protein (123aa)

This feature has no annotations

H3-16-all-fractions_k255_5544639_10
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6427..6636
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B39788
Uncharacterized protein {ECO:0000313|EMBL:KGD68905.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
H3-16-all-fractions_k255_5544639_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6705..7382
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003717C2B
Uncharacterized protein {ECO:0000313|EMBL:KIC94724.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
H3-16-all-fractions_k255_5544639_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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7470..7802
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036188D9
ArsR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_5544639_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7869..9278
DNA (1410bp) protein (470aa)
Rhodanese-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP7_NIAKG
rhodanese-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_5544639_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9512..10117)
DNA (606bp) protein (202aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP9_NIAKG
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW02902.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 14 items

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