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H3-16-all-fractions_k255_6734410

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6734410_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808377
ATP/cobalamin adenosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_6734410_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(438..1142)
DNA (705bp) protein (235aa)
ABC transporter n=1 Tax=Niabella aurantiaca RepID=UPI000377345B
macrolide ABC transporter ATP-binding protein
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15549.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
H3-16-all-fractions_k255_6734410_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1146..1442)
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA0_NIAKG
aspartyl/glutamyl-tRNA amidotransferase subunit C
H3-16-all-fractions_k255_6734410_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1543..2538
DNA (996bp) protein (332aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ49_CHIPD
tryptophanyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_6734410_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2645..3280
DNA (636bp) protein (212aa)
deoxynucleoside kinase n=1 Tax=Segetibacter koreensis RepID=UPI00037BCEEA
Deoxynucleoside kinase {ECO:0000313|EMBL:KIC90448.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
deoxyadenosine kinase
H3-16-all-fractions_k255_6734410_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3284..3886)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH97_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01707.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_6734410_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4123..5727)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000256|SAAS:SAAS00051801};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH96_NIAKG
phosphoenolpyruvate carboxykinase
H3-16-all-fractions_k255_6734410_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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5882..7204
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3698
peptidase M24
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
H3-16-all-fractions_k255_6734410_9
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7228..7647
DNA (420bp) protein (140aa)
S23 ribosomal protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5F2_FLAB3
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:ACU07640.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
H3-16-all-fractions_k255_6734410_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7695..8468
DNA (774bp) protein (258aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH94_NIAKG
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AEW01704.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_6734410_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8544..8789
DNA (246bp) protein (82aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH93_NIAKG
phosphoribosylformylglycinamidine synthase PurS
H3-16-all-fractions_k255_6734410_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8885..9550
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NMS5_9SPHI
16S rRNA methyltransferase
H3-16-all-fractions_k255_6734410_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9603..10043
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH90_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01700.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_6734410_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10202..12205
DNA (2004bp) protein (668aa)
Aminopeptidase N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH89_NIAKG
Peptidase M1 {ECO:0000313|EMBL:KIC95562.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aminopeptidase N
H3-16-all-fractions_k255_6734410_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12319..12984)
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W7_NIAKG
two component transcriptional regulator, LuxR family
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC92938.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Displaying 15 items

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