ggKbase home page

H3-16-all-fractions_k255_818982

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_818982_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
General substrate transporter n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CDR5_SPHS2
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ADZ78945.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
H3-16-all-fractions_k255_818982_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(431..1144)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL19_NIAKG
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
H3-16-all-fractions_k255_818982_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1268..3094)
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E871_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO43433.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
H3-16-all-fractions_k255_818982_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3097..4068)
DNA (972bp) protein (324aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL15_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_818982_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4078..4692)
DNA (615bp) protein (205aa)
RNA polymerase subunit sigma-24 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B49EEB
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETZ22956.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RNA polymerase sigma-70 factor
H3-16-all-fractions_k255_818982_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4857..5408)
DNA (552bp) protein (184aa)
Acetyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09D04_STIAD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ADO67912.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU69707.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
H3-16-all-fractions_k255_818982_7
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5545..6189)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HA13_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZH75540.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
H3-16-all-fractions_k255_818982_8
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6528..6698)
DNA (171bp) protein (57aa)
membrane protein n=1 Tax=Segetibacter koreensis RepID=UPI000382D711
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20246.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
H3-16-all-fractions_k255_818982_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7208..8104
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98336.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_818982_10
unknown

Not on your lists

comp(8315..8476)
DNA (162bp) protein (54aa)

This feature has no annotations

H3-16-all-fractions_k255_818982_11
unknown

Not on your lists

comp(8549..8956)
DNA (408bp) protein (136aa)

This feature has no annotations

H3-16-all-fractions_k255_818982_12
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9153..11564
DNA (2412bp) protein (804aa)
peptidase n=1 Tax=Pontibacter roseus RepID=UPI00037555F1
peptidase
Peptidase {ECO:0000313|EMBL:AKD05881.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
H3-16-all-fractions_k255_818982_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12209..13462
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ66_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01067.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_818982_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13738..15618
DNA (1881bp) protein (627aa)
aminopeptidase N n=1 Tax=Spirosoma panaciterrae RepID=UPI000373C756
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AKD58380.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
H3-16-all-fractions_k255_818982_15
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15692..18025)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZF3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFD38680.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
Displaying 15 items

View Taxonomy