ggKbase home page

H3-16-all-fractions_k255_3992148

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_3992148_1
unknown

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

H3-16-all-fractions_k255_3992148_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(137..481)
DNA (345bp) protein (115aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP4_9CHLR
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCF82456.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
glyoxalase/bleomycin resistance protein/dioxygenase
H3-16-all-fractions_k255_3992148_3
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(481..948)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00036F903F
Uncharacterized protein {ECO:0000313|EMBL:KKD03185.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
H3-16-all-fractions_k255_3992148_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(932..1252)
DNA (321bp) protein (107aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM7_PSEUX
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEA23234.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
H3-16-all-fractions_k255_3992148_5
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1297..1926)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B33BF3
Peptidase S1 family protein {ECO:0000313|EMBL:GAB41073.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
peptidase S01 family protein
H3-16-all-fractions_k255_3992148_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1923..3035)
DNA (1113bp) protein (371aa)
LacI family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B4684A
regulatory protein LacI
Regulatory protein LacI {ECO:0000313|EMBL:AHG92061.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-16-all-fractions_k255_3992148_7
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3041..4012
DNA (972bp) protein (324aa)
inosose dehydratase n=1 Tax=Patulibacter americanus RepID=UPI0003B5B43A
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCH75240.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
inositol catabolism protein
H3-16-all-fractions_k255_3992148_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4009..5034
DNA (1026bp) protein (342aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B42AB7
sugar ABC transporter periplasmic protein-like protein
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:ADG88424.1}; Flags: Precursor;; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
H3-16-all-fractions_k255_3992148_9
actinobacterium acAMD-5, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5215..6201
DNA (987bp) protein (329aa)
ribose ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B6B6DF
Inner-membrane translocator {ECO:0000313|EMBL:KGA09126.1}; TaxID=1504319 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-5.;"
inner-membrane translocator
H3-16-all-fractions_k255_3992148_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

6198..7031
DNA (834bp) protein (278aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B734C4
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAM00646.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
H3-16-all-fractions_k255_3992148_11
actinobacterium acAMD-5, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7028..8248
DNA (1221bp) protein (407aa)
Putative oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5V6_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KGA09119.1}; TaxID=1504319 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-5.;"
putative oxidoreductase
H3-16-all-fractions_k255_3992148_12
S_OP1_64_32, KB1, Bacteria

Not on your lists

8245..9279
DNA (1035bp) protein (345aa)
myo-inositol 2-dehydrogenase (EC:1.1.1.18)
inositol 2-dehydrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B3FE7A
Tax=S_OP1_64_32
H3-16-all-fractions_k255_3992148_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..10106
DNA (831bp) protein (277aa)
Short chain dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQC9_9PROT
Short chain dehydrogenase {ECO:0000313|EMBL:EDP65016.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative oxidoreductase
H3-16-all-fractions_k255_3992148_14
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10103..11017
DNA (915bp) protein (305aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-O22 RepID=UPI00037E3156
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCI53249.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
H3-16-all-fractions_k255_3992148_15
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11014..11979
DNA (966bp) protein (322aa)
sugar kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B6557C
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:ADI10140.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
H3-16-all-fractions_k255_3992148_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11976..12911
DNA (936bp) protein (312aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Patulibacter americanus RepID=UPI0003B53075
thiamine pyrophosphate enzyme, central region
Thiamine pyrophosphate enzyme, central region {ECO:0000313|EMBL:ABG04678.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Displaying 16 items

View Taxonomy