ggKbase home page

H3-16-all-fractions_k255_4506773

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4506773_1
unknown

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003707A9E
H3-16-all-fractions_k255_4506773_2
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(416..1723)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MT76_9ACTO
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDN23992.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
livK; ABC transporter substrate-binding protein
H3-16-all-fractions_k255_4506773_3
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1720..2805)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D9F
livM; inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AIJ22083.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H3-16-all-fractions_k255_4506773_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2802..3635)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PP76_9ACTO
livH; ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AIJ22082.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H3-16-all-fractions_k255_4506773_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3705..4412)
DNA (708bp) protein (236aa)
ATPase component of ABC-type branched-chain amino acid transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8I893_AMYMU
livF; branched-chain amino acid ABC transporter ATPase
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AEK39890.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H3-16-all-fractions_k255_4506773_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4405..5253)
DNA (849bp) protein (283aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) (EC:3.6.3.-)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) {ECO:0000313|EMBL:CCH85996.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCH85996.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ERI3_MODMB
H3-16-all-fractions_k255_4506773_7
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5374..7104)
DNA (1731bp) protein (577aa)
cellulase (EC:3.2.1.4)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003671E36
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
H3-16-all-fractions_k255_4506773_8

Not on your lists

comp(7296..7700)
DNA (405bp) protein (135aa)
Transcriptional regulator, HxlR family n=1 Tax=mine drainage metagenome RepID=T1AH65_9ZZZZ
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EQD59841.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
HxlR family transcriptional regulator
H3-16-all-fractions_k255_4506773_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7767..8690
DNA (924bp) protein (308aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVH2_CATAD
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACU69328.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H3-16-all-fractions_k255_4506773_10
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8813..9628
DNA (816bp) protein (272aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Streptomyces chartreusis RepID=UPI000262FE65
Uncharacterized protein {ECO:0000313|EMBL:KDN78812.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
H3-16-all-fractions_k255_4506773_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9625..10533
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWH9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41363.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
H3-16-all-fractions_k255_4506773_12
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10473..11645)
DNA (1173bp) protein (391aa)
Aminotransferase class V n=2 Tax=Haloferax RepID=L5NX31_9EURY
Aminotransferase class V {ECO:0000313|EMBL:ELZ95518.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
aminotransferase class V
H3-16-all-fractions_k255_4506773_13
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11711..12202
DNA (492bp) protein (164aa)
MarR family transcriptional regulator n=4 Tax=Gammaproteobacteria RepID=T0QNV0_AERSA
Transcriptional regulator {ECO:0000313|EMBL:KIJ74594.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
transcriptional regulator
H3-16-all-fractions_k255_4506773_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

12199..13089
DNA (891bp) protein (297aa)
hypothetical protein SsomD4_18373 id=4290396 bin=GWC2_Chloroflexi_73_18 species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
H3-16-all-fractions_k255_4506773_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13180..13767
DNA (588bp) protein (196aa)
riboflavin biosynthesis protein RibD n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00037546D4
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:EWT07428.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
deaminase-reductase domain-containing protein
H3-16-all-fractions_k255_4506773_16
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13726..14658)
DNA (933bp) protein (311aa)
LysR family transcriptional regulator n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GYW1_STRA9
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AIA06862.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
Displaying 16 items

View Taxonomy