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H3-18-all-fractions_k255_336765

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_336765_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..2896
DNA (2895bp) protein (965aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase (NAD) n=1 Tax=Nocardioides sp. CF8 RepID=R7Y048_9ACTO
Glutamate dehydrogenase (NAD) {ECO:0000313|EMBL:EON24992.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
H3-18-all-fractions_k255_336765_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2914..4308
DNA (1395bp) protein (465aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG07_NOCSJ
Amidase {ECO:0000313|EMBL:ABL80742.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4305..5177
DNA (873bp) protein (291aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0D8_9ACTO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EON24993.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
short-chain dehydrogenase/reductase SDR
H3-18-all-fractions_k255_336765_4
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5174..5821)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003684B1B
Putative secreted protein {ECO:0000313|EMBL:EGD40591.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
peptidase C60, sortase A and B
H3-18-all-fractions_k255_336765_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5917..7200)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000368DA1C
LigA {ECO:0000313|EMBL:EGD40592.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
H3-18-all-fractions_k255_336765_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7411..8412)
DNA (1002bp) protein (334aa)
Probable DNA repair protein Noca_1234 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG13_NOCSJ
DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_7
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8470..9648
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003618CB3
Secretion protein HlyD {ECO:0000313|EMBL:EGD40704.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
transporter
H3-18-all-fractions_k255_336765_8
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9645..10319
DNA (675bp) protein (225aa)
Putative macrolide efflux ABC transporter, ATP-binding protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V1S6_9ACTO
Putative macrolide efflux ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGD40703.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
ABC transporter ATP-binding protein
H3-18-all-fractions_k255_336765_9
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10316..11542
DNA (1227bp) protein (409aa)
macrolide ABC transporter permease n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035E7512
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:EGD40702.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
macrolide ABC transporter permease
H3-18-all-fractions_k255_336765_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11560..12375
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036E9921
Uncharacterized protein {ECO:0000313|EMBL:KJL40467.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
H3-18-all-fractions_k255_336765_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12375..13979
DNA (1605bp) protein (535aa)
RND_mfp multi-domain protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SG02_PROA4
hypothetical protein
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AIY18314.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_336765_12
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14021..14944
DNA (924bp) protein (308aa)
DNA polymerase LigD, ligase domain-containing protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E1P4_9MICO
DNA ligase {ECO:0000313|EMBL:KGN37676.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
DNA ligase
H3-18-all-fractions_k255_336765_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14944..15825
DNA (882bp) protein (294aa)
ATP-dependent DNA ligase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037C3F14
ATP dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ABL80751.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_14
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15928..17115
DNA (1188bp) protein (396aa)
HNH endonuclease n=1 Tax=Frankia sp. BCU110501 RepID=UPI00037DDEA7
Uncharacterized protein {ECO:0000313|EMBL:KJK41244.1}; Flags: Fragment;; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
H3-18-all-fractions_k255_336765_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17112..18035)
DNA (924bp) protein (308aa)
Putative Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:CCM64042.1}; EC=2.4.1.83 {ECO:0000313|EMBL:CCM64042.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Putative Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5W5_9ACTN
family 2 glycosyl transferase
H3-18-all-fractions_k255_336765_16
unknown

Not on your lists

comp(18032..19996)
DNA (1965bp) protein (655aa)

This feature has no annotations

H3-18-all-fractions_k255_336765_17
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20084..21877
DNA (1794bp) protein (598aa)
peroxidase (EC:1.11.1.7)
Peroxidase {ECO:0000313|EMBL:AFY31650.1}; EC=1.11.1.7 {ECO:0000313|EMBL:AFY31650.1};; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI0003701510
H3-18-all-fractions_k255_336765_18
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21874..23196
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036A07E9
Mycobacterium llatzerense strain CLUC14 Mllat_contig000011, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17108.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
cytochrome P450
H3-18-all-fractions_k255_336765_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23148..24032)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKZ2_BLASD
Putative transmembrane protein HieC {ECO:0000313|EMBL:EWC60004.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H3-18-all-fractions_k255_336765_20
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24043..24747)
DNA (705bp) protein (235aa)
UPI0003CED182 related cluster n=1 Tax=unknown RepID=UPI0003CED182
Uncharacterized protein {ECO:0000313|EMBL:ETW14786.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
hypothetical protein
H3-18-all-fractions_k255_336765_21
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24744..26801)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FB56_DESAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL04142.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
H3-18-all-fractions_k255_336765_22
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26798..27727)
DNA (930bp) protein (310aa)
Putative Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:CCM64042.1}; EC=2.4.1.83 {ECO:0000313|EMBL:CCM64042.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Putative Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5W5_9ACTN
glycosyltransferase
H3-18-all-fractions_k255_336765_23
unknown

Not on your lists

comp(27739..29733)
DNA (1995bp) protein (665aa)

This feature has no annotations

H3-18-all-fractions_k255_336765_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29851..30963
DNA (1113bp) protein (371aa)
Peptide chain release factor 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG43_NOCSJ
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_336765_25
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30960..31568)
DNA (609bp) protein (203aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY16713.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
H3-18-all-fractions_k255_336765_26
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31649..32344
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG47_NOCSJ
cell division ATP-binding protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ABL80782.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32369..33289
DNA (921bp) protein (307aa)
Cell division protein FtsX n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG48_NOCSJ
cell division protein FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_28
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33350..34615
DNA (1266bp) protein (422aa)
Peptidase M23B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG49_NOCSJ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABL80784.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_29
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34642..35118
DNA (477bp) protein (159aa)
SsrA-binding protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=SSRP_NOCSJ
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_336765_30
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35124..35987
DNA (864bp) protein (288aa)
Amidohydrolase 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG52_NOCSJ
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABL80787.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying items 1-30 of 35 in total

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