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H3-18-all-fractions_k255_3970358

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_3970358_1
unknown

Not on your lists

comp(3..887)
DNA (885bp) protein (295aa)

This feature has no annotations

H3-18-all-fractions_k255_3970358_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(884..1537)
DNA (654bp) protein (218aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU5_NOCSJ
RNA polymerase sigma factor SigM
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABL84180.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1534..3387)
DNA (1854bp) protein (618aa)
Serine/threonine protein kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU4_NOCSJ
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABL84179.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3437..5041)
DNA (1605bp) protein (535aa)
Integral membrane protein MviN n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU3_NOCSJ
integral membrane protein MviN
Integral membrane protein MviN {ECO:0000313|EMBL:ABL84178.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5106..7268)
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037D2E76
Uncharacterized protein {ECO:0000313|EMBL:EGD45202.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
H3-18-all-fractions_k255_3970358_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7371..8789
DNA (1419bp) protein (473aa)
HDIG domain-containing protein (EC:2.7.7.25)
HDIG domain protein {ECO:0000313|EMBL:ABL84176.1}; EC=2.7.7.72 {ECO:0000313|EMBL:ABL84176.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
HDIG domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQU1_NOCSJ
H3-18-all-fractions_k255_3970358_7
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8790..11093)
DNA (2304bp) protein (768aa)
putative E3 ubiquitin-protein ligase HERC4 (EC:6.3.2.-)
BNR repeat domain protein {ECO:0000313|EMBL:AJR18581.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
Cell wall surface anchor family protein id=3178612 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
H3-18-all-fractions_k255_3970358_8
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11231..12202
DNA (972bp) protein (324aa)
Pyridoxal-phosphate dependent protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SDI0_9ACTO
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EFQ82557.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
1-aminocyclopropane-1-carboxylate deaminase
H3-18-all-fractions_k255_3970358_9
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12199..12909)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00035E0390
Uncharacterized protein {ECO:0000313|EMBL:KGM02369.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
H3-18-all-fractions_k255_3970358_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12956..13816)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEF2_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80187.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_11
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13962..15053)
DNA (1092bp) protein (364aa)
Inositol 1-phosphate synthase {ECO:0000313|EMBL:EFP58450.1}; EC=5.5.1.- {ECO:0000313|EMBL:EFP58450.1};; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
Inositol 1-phosphate synthase n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B8U0_9MICO
inositol-3-phosphate synthase
H3-18-all-fractions_k255_3970358_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15076..15693)
DNA (618bp) protein (206aa)
Transcriptional regulator, PadR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQT7_NOCSJ
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABL84172.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15899..18127
DNA (2229bp) protein (743aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:AJR18870.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AJR18870.1};; EC=3.4.-.- {ECO:0000313|EMBL:AJR18870.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003671C0D
glycosyl transferase family protein
H3-18-all-fractions_k255_3970358_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18124..19584
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036BA43A
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:ABL84170.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19495..20562)
DNA (1068bp) protein (356aa)
Alanine racemase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQT4_NOCSJ
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:ABL84169.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20559..21707)
DNA (1149bp) protein (383aa)
Methicillin resistance protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQT3_NOCSJ
methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:ABL84168.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_17
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21874..22692)
DNA (819bp) protein (273aa)
Lipase/esterase {ECO:0000313|EMBL:ABY21857.1}; EC=3.1.1.- {ECO:0000313|EMBL:ABY21857.1};; TaxID=288705 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484; / NBRC 15589 / NCIMB 2235).;"
lipase/esterase n=1 Tax=Serinicoccus profundi RepID=UPI000255ED12
lipase/esterase
H3-18-all-fractions_k255_3970358_18
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22689..23492)
DNA (804bp) protein (268aa)
Putative endonuclease 4 {ECO:0000313|EMBL:CCH73441.1}; EC=3.1.21.2 {ECO:0000313|EMBL:CCH73441.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
endonuclease IV n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B5E593
endonuclease IV
H3-18-all-fractions_k255_3970358_19
unknown

Not on your lists

comp(23512..23652)
DNA (141bp) protein (47aa)

This feature has no annotations

H3-18-all-fractions_k255_3970358_20
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23718..24377
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HC11_ARTCA
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACL38721.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
H3-18-all-fractions_k255_3970358_21
unknown

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24374..24571
DNA (198bp) protein (66aa)

This feature has no annotations

H3-18-all-fractions_k255_3970358_22
unknown

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24568..25020
DNA (453bp) protein (151aa)

This feature has no annotations

H3-18-all-fractions_k255_3970358_23
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25175..25465
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RS6_NOCSJ
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000255|HAMAP-Rule:MF_00360}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
H3-18-all-fractions_k255_3970358_24
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25494..25625
DNA (132bp) protein (44aa)
single-stranded DNA-binding protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003650339
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 24 items

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