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H3-18-all-fractions_k255_62858

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_62858_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IJD3_9BURK
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:CDM65540.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
beta-lactamase
H3-18-all-fractions_k255_62858_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(641..1621)
DNA (981bp) protein (327aa)
Predicted dehydrogenase {ECO:0000313|EMBL:CDM65541.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative dehydrogenase-like protein id=12555151 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative dehydrogenase-like protein
H3-18-all-fractions_k255_62858_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1976..3637
DNA (1662bp) protein (554aa)
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN3_CHLTF
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:CDM65542.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
4-amino-4-deoxy-L-arabinose transferase-like protein
H3-18-all-fractions_k255_62858_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3735..4691)
DNA (957bp) protein (319aa)
Alpha/beta hydrolase family {ECO:0000313|EMBL:CDM66621.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_62858_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4801..5376)
DNA (576bp) protein (192aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Formate dehydrogenase family accessory protein FdhD id=2854510 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
molybdopterin-guanine dinucleotide biosynthesis protein A
H3-18-all-fractions_k255_62858_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5707..7578
DNA (1872bp) protein (624aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEX1_CHLTF
SpoIVB peptidase S55 {ECO:0000313|EMBL:CDM66619.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_62858_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7712..8560
DNA (849bp) protein (283aa)
UPF0173 metal-dependent hydrolase Glov_0171 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=Y171_GEOLS
beta-lactamase
Tax=RBG_16_Gamma2_65_34_curated
H3-18-all-fractions_k255_62858_8

Not on your lists

comp(8596..9252)
DNA (657bp) protein (219aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00277524};; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEN7_9BACT
hypothetical protein
H3-18-all-fractions_k255_62858_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9270..10763
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000346DF35
aromatic-L-amino-acid decarboxylase
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_62858_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10763..12730
DNA (1968bp) protein (656aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLL0_CHLTF
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:CDM65724.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pyruvate phosphate dikinase PEP
H3-18-all-fractions_k255_62858_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12730..13263
DNA (534bp) protein (178aa)
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDM65723.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_62858_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13457..14179
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CL14_SYNLT
H3-18-all-fractions_k255_62858_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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14176..14976
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCZ4_SINAD
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA26708.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
H3-18-all-fractions_k255_62858_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14998..16602
DNA (1605bp) protein (535aa)
Anthranilate/para-aminobenzoate synthase component I {ECO:0000313|EMBL:CDM65721.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CDM65721.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=12557008 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trpE; anthranilate synthase, catalytic subunit
H3-18-all-fractions_k255_62858_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16599..17564
DNA (966bp) protein (322aa)
Ankyrin repeat-containing protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZK2_9GAMM
Ankyrin repeat-containing protein {ECO:0000313|EMBL:CDM65720.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_62858_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17554..18129
DNA (576bp) protein (192aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:CDM65719.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CDM65719.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glutamine amidotransferase of anthranilate synthase id=1985794 bin=GWB2_Nitrospirae_rel_47_37 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
glutamine amidotransferase of anthranilate synthase
H3-18-all-fractions_k255_62858_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18289..19389
DNA (1101bp) protein (367aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase id=4726952 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
H3-18-all-fractions_k255_62858_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19393..20208
DNA (816bp) protein (272aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037654F2
indole-3-glycerol phosphate synthase
H3-18-all-fractions_k255_62858_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20215..20883
DNA (669bp) protein (223aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=4951781 bin=GWC2_Planctomycetes_45_44 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
H3-18-all-fractions_k255_62858_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21100..22047
DNA (948bp) protein (316aa)
Sensor histidine kinase response receiver diguanylate cyclase n=2 Tax=Geobacter sulfurreducens RepID=D7AG62_GEOSK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM66306.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sensor histidine kinase response receiver diguanylate cyclase
H3-18-all-fractions_k255_62858_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22192..23409
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) id=14430224 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
trpB; tryptophan synthase subunit beta
H3-18-all-fractions_k255_62858_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23406..24212
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain id=1708121 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
H3-18-all-fractions_k255_62858_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


24518..25570
DNA (1053bp) protein (351aa)
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
recA; recA protein; K03553 recombination protein RecA id=12555343 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recA; recA protein
H3-18-all-fractions_k255_62858_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

25749..27083
DNA (1335bp) protein (445aa)
Amidohydrolase n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJN5_9BACT
Amidohydrolase {ECO:0000313|EMBL:ABV27195.1}; TaxID=458033 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
cytosine deaminase
H3-18-all-fractions_k255_62858_25
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(27095..28618)
DNA (1524bp) protein (508aa)
Hypothetical membrane protein id=2026755 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_13_Chloroflexi_68_17_curated
H3-18-all-fractions_k255_62858_26
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

29109..29585
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000377CB85
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
H3-18-all-fractions_k255_62858_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(30101..31195)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF25_CHLTF
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:CDM65559.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying 27 items

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