ggKbase home page

H3-18-all-fractions_k255_4830257

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_4830257_1
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25..621)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJA9_MOOTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC19480.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
H3-18-all-fractions_k255_4830257_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691..3507)
DNA (2817bp) protein (939aa)
aminopeptidase N n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFE4
peptidase M1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
H3-18-all-fractions_k255_4830257_3
unknown

Not on your lists

3672..3869
DNA (198bp) protein (66aa)

This feature has no annotations

H3-18-all-fractions_k255_4830257_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3956..4372)
DNA (417bp) protein (139aa)
Response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DC19_MYXXD
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CDM66616.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator
H3-18-all-fractions_k255_4830257_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4551..5732)
DNA (1182bp) protein (394aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDM66980.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Response regulator receiver modulated metal dependent phosphohydrolase id=4813970 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response receiver-modulated cyclic diguanylate phosphodiesterase
H3-18-all-fractions_k255_4830257_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6442..8394
DNA (1953bp) protein (651aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI15_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:CDM65575.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
intracellular alkaline serine proteinase
H3-18-all-fractions_k255_4830257_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8660..10699
DNA (2040bp) protein (680aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI15_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:CDM65575.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S8 and S53 subtilisin kexin sedolisin
H3-18-all-fractions_k255_4830257_8

Not on your lists

10733..11644
DNA (912bp) protein (304aa)
Acetyltransferase n=2 Tax=Streptomyces albus J1074 RepID=M9SJD3_9ACTO
Putative acetyltransferase {ECO:0000313|EMBL:AHG52931.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Acetyltransferase
H3-18-all-fractions_k255_4830257_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11753..13744
DNA (1992bp) protein (664aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase,Response regulator receiver domain protein,histidine kinase {ECO:0000313|EMBL:CDM65576.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multi-sensor signal transduction histidine kinase id=14626073 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
H3-18-all-fractions_k255_4830257_10
unknown

Not on your lists

comp(13673..13906)
DNA (234bp) protein (78aa)

This feature has no annotations

H3-18-all-fractions_k255_4830257_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13860..15311)
DNA (1452bp) protein (484aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT
sigma-54 dependent DNA-binding response regulator
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
H3-18-all-fractions_k255_4830257_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15762..15974)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66920.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_4830257_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15989..16771)
DNA (783bp) protein (261aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:CDM66921.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CDM66921.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short chain enoyl-CoA hydratase (EC:4.2.1.55)
Short chain enoyl-CoA hydratase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIZ6_CHLTF
H3-18-all-fractions_k255_4830257_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16975..17349)
DNA (375bp) protein (125aa)
PilZ domain-containing protein {ECO:0000313|EMBL:CDM66922.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_4830257_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17466..18281)
DNA (816bp) protein (272aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM66923.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CDM66923.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CGE7_9EURY
3-hydroxyacyl-CoA dehydrogenase
H3-18-all-fractions_k255_4830257_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18639..19778
DNA (1140bp) protein (380aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thioredoxin reductase
Thioredoxin reductase id=2965313 bin=GWF2_Syntrophobacterales_56_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
H3-18-all-fractions_k255_4830257_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19930..20541)
DNA (612bp) protein (204aa)
UPF0314 protein RB9128 id=4419051 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
H3-18-all-fractions_k255_4830257_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20545..20985)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036436AB
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CDM66925.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HxlR family transcriptional regulator
H3-18-all-fractions_k255_4830257_19
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

21251..22225
DNA (975bp) protein (325aa)
Diguanylate cyclase n=2 Tax=Chloroflexus RepID=A9WGU1_CHLAA
diguanylate cyclase
Tax=BJP_IG2069_Spirochaetales_48_31
H3-18-all-fractions_k255_4830257_20
GWA2_OD1_42_9_A833, Azambacteria, Parcubacteria, Bacteria

Not on your lists

22437..23000
DNA (564bp) protein (188aa)
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KKS75406.1}; TaxID=1618613 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_42_9.;"
N-acetyltransferase GCN5 id=24521879 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
N-acetyltransferase GCN5
H3-18-all-fractions_k255_4830257_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23004..24971
DNA (1968bp) protein (656aa)
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PMR7_9DELT
Peptidase S9 {ECO:0000313|EMBL:KFA88935.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
peptidase, s9 prolyl oligopeptidase
H3-18-all-fractions_k255_4830257_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25112..26485)
DNA (1374bp) protein (458aa)
Cytochrome P450 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHY4_CHLTF
Cytochrome P450 {ECO:0000313|EMBL:CDM66829.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cytochrome P450
H3-18-all-fractions_k255_4830257_23
unknown

Not on your lists

26619..27380
DNA (762bp) protein (254aa)

This feature has no annotations

H3-18-all-fractions_k255_4830257_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27459..28196)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEQ5_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66333.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4830257_25
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28645..29313
DNA (669bp) protein (223aa)
Metal dependent phosphohydrolase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2I2_DESAP
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACA59213.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
H3-18-all-fractions_k255_4830257_26
unknown

Not on your lists

29324..29479
DNA (156bp) protein (52aa)

This feature has no annotations

H3-18-all-fractions_k255_4830257_27
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29711..31951
DNA (2241bp) protein (747aa)
peptidase M3 n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5D4BD
Peptidase M3 {ECO:0000313|EMBL:GAL85465.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
peptidyl-dipeptidase Dcp
H3-18-all-fractions_k255_4830257_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(32267..33214)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7H4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17591.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
H3-18-all-fractions_k255_4830257_29
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(33228..33488)
DNA (261bp) protein (87aa)
N-acetyltransferase n=2 Tax=Chloroflexus RepID=A9WHF1_CHLAA
N-acetyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 29 items

View Taxonomy