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H3-18-all-fractions_k255_4981501

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_4981501_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2..1267
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2E6_METPS
Subtilisin-like serine protease {ECO:0000313|EMBL:CDM65844.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4981501_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1364..1720)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64601.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_4981501_3
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1853..2416
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YIG1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83246.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
molecular chaperone DnaJ
H3-18-all-fractions_k255_4981501_4
unknown

Not on your lists

2421..2828
DNA (408bp) protein (136aa)

This feature has no annotations

H3-18-all-fractions_k255_4981501_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2961..3989
DNA (1029bp) protein (343aa)
Radical SAM protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJE3_SORCE
DNA repair photolyase {ECO:0000313|EMBL:CDM64880.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
radical SAM protein
H3-18-all-fractions_k255_4981501_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4118..4543
DNA (426bp) protein (142aa)
Putative signal-transduction protein with CBS domains id=4374060 bin=GWF2_Methylomirabilis_70_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
signal-transduction protein with CBS domains
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H3-18-all-fractions_k255_4981501_7
R_OP11_Woesebacteria_41_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

4662..5852
DNA (1191bp) protein (397aa)
Quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase id=3624639 bin=GWC2_Ignavibacteria_56_12 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_41_10_curated
H3-18-all-fractions_k255_4981501_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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6043..7260
DNA (1218bp) protein (406aa)
Galactose oxidase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R799_9CLOT
Kelch repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
H3-18-all-fractions_k255_4981501_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7429..8445)
DNA (1017bp) protein (339aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW93541.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NAD-dependent epimerase/dehydratase family protein
H3-18-all-fractions_k255_4981501_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8563..9600)
DNA (1038bp) protein (346aa)
Glutamine--fructose-6-phosphate transaminase {ECO:0000313|EMBL:CDM64600.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CDM64600.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028G3_SOLUE
H3-18-all-fractions_k255_4981501_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9973..11994
DNA (2022bp) protein (674aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003637B4F
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:CDM64596.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glycoside hydrolase, family 20, catalytic core
H3-18-all-fractions_k255_4981501_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12020..13261
DNA (1242bp) protein (414aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64586.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ial:IALB_0983 heparan-alpha-glucosaminide N-acetyltransferase id=720870 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
heparan-alpha-glucosaminide N-acetyltransferase
H3-18-all-fractions_k255_4981501_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13388..15142)
DNA (1755bp) protein (585aa)
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:CDM64581.1}; EC=3.5.1.81 {ECO:0000313|EMBL:CDM64581.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acyl-D-amino-acid deacylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INE0_KORVE
N-acyl-D-amino-acid deacylase
H3-18-all-fractions_k255_4981501_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15246..16751
DNA (1506bp) protein (502aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=12556638 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
H3-18-all-fractions_k255_4981501_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16848..17762
DNA (915bp) protein (305aa)
Uncharacterized protein id=2147963 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H3-18-all-fractions_k255_4981501_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17829..19241)
DNA (1413bp) protein (471aa)
Amino acid transporter n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHF3_CHLTF
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM67062.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid transporter
H3-18-all-fractions_k255_4981501_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19269..20681)
DNA (1413bp) protein (471aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Diaminopimelate decarboxylase n=1 Tax=Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163 RepID=V1FJM6_SALCE
SBOV24251; diaminopimelate decarboxylase
H3-18-all-fractions_k255_4981501_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20768..21910
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7A3AB
Selenocysteine lyase {ECO:0000313|EMBL:CDM67064.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
selenocysteine lyase
H3-18-all-fractions_k255_4981501_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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22226..22438
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD09225.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
H3-18-all-fractions_k255_4981501_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22677..23348
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AVA0_KROS4
Uncharacterized protein {ECO:0000313|EMBL:CDM65548.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-18-all-fractions_k255_4981501_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23508..23807
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037D69CC
Uncharacterized protein {ECO:0000313|EMBL:CDM65549.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-18-all-fractions_k255_4981501_22
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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23955..24836
DNA (882bp) protein (294aa)
Putative Zn-dependent hydrolase of beta-lactamase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q0B5_DESAF
Putative Zn-dependent hydrolase of beta-lactamase {ECO:0000313|EMBL:EMG36561.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
hypothetical protein
H3-18-all-fractions_k255_4981501_23
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25332..25886)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9ENE2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKU97481.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
H3-18-all-fractions_k255_4981501_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26219..27754)
DNA (1536bp) protein (512aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INU1_KORVE
glycine dehydrogenase subunit 2
H3-18-all-fractions_k255_4981501_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27801..29168)
DNA (1368bp) protein (456aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 id=4385686 bin=GWC2_Pelobacter_58_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
H3-18-all-fractions_k255_4981501_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(29178..29564)
DNA (387bp) protein (129aa)
Glycine cleavage system H protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI9_CHLTF
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycine cleavage system H protein
H3-18-all-fractions_k255_4981501_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(29680..30795)
DNA (1116bp) protein (372aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Aminomethyltransferase n=2 Tax=Desulfitobacterium hafniense RepID=GCST_DESHD
glycine cleavage system protein T
H3-18-all-fractions_k255_4981501_28
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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31043..32491
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036FF722
serine/threonine protein kinase
TPR repeat-containing protein {ECO:0000313|EMBL:ACK65365.1}; Flags: Precursor;; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
Displaying 28 items

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