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H3-18-all-fractions_k255_1282307

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_1282307_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..200
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJD8_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY53488.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
H3-18-all-fractions_k255_1282307_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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443..847
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000378D8F3
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:ABV97950.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
H3-18-all-fractions_k255_1282307_3
unknown

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comp(984..1118)
DNA (135bp) protein (45aa)

This feature has no annotations

H3-18-all-fractions_k255_1282307_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1196..1480)
DNA (285bp) protein (95aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULN9_ANASK
pyridine nucleotide-disulfide oxidoreductase dimerisation protein
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ACG72897.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
H3-18-all-fractions_k255_1282307_5
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(1537..1917)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A8U5_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ69567.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
H3-18-all-fractions_k255_1282307_6
unknown

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comp(1917..2030)
DNA (114bp) protein (38aa)

This feature has no annotations

H3-18-all-fractions_k255_1282307_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2079..2354)
DNA (276bp) protein (92aa)
putative transmembrane anti-sigma factor
anti-sigma factor id=24427963 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_1282307_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2355..3146)
DNA (792bp) protein (264aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
rpoE; RNA polymerase sigma-E factor
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_1282307_9
unknown

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4249..4356
DNA (108bp) protein (36aa)

This feature has no annotations

H3-18-all-fractions_k255_1282307_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5139..5702)
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
Elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1282307_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5802..6365)
DNA (564bp) protein (188aa)
Putative acyl-CoA thioesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9H7_GEMAT
putative acyl-CoA thioesterase
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:AHG91223.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1282307_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6682..7410
DNA (729bp) protein (243aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9H8_GEMAT
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH39155.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_1282307_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7407..9995
DNA (2589bp) protein (863aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9H9_GEMAT
protein of unknown function DUF214
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-18-all-fractions_k255_1282307_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10005..11747)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM3_GEMAT
Peptidase M30, hyicolysin
Peptidase M30, hyicolysin {ECO:0000313|EMBL:AHG89376.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1282307_15
unknown

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comp(11868..12059)
DNA (192bp) protein (64aa)

This feature has no annotations

H3-18-all-fractions_k255_1282307_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12269..14587)
DNA (2319bp) protein (773aa)
Transcription accessory protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I1_GEMAT
Tex-like protein
Tex-like protein {ECO:0000313|EMBL:AHG91231.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_1282307_17
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14967..15989
DNA (1023bp) protein (341aa)
Kinesin light chain-like protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YXA3_LYNSP
Kinesin light chain-like protein {ECO:0000313|EMBL:EAW34379.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
Displaying 17 items

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