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H3-18-all-fractions_k255_5376738

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_5376738_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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173..2161
DNA (1989bp) protein (663aa)
Translation initiation factor IF-2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N8_GEMAT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
initiation factor 2
H3-18-all-fractions_k255_5376738_2
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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2205..2486
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=1250712 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
H3-18-all-fractions_k255_5376738_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2533..3003
DNA (471bp) protein (157aa)
Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RBFA_GEMAT
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2978..3874
DNA (897bp) protein (299aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
tRNA pseudouridine synthase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P0_GEMAT
tRNA pseudouridine synthase B
H3-18-all-fractions_k255_5376738_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3871..4812
DNA (942bp) protein (314aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
riboflavin biosynthesis protein RibF
H3-18-all-fractions_k255_5376738_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4932..6629
DNA (1698bp) protein (566aa)
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT
secD; protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000255|HAMAP-Rule:MF_01463}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_5376738_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6635..7645
DNA (1011bp) protein (337aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF
Protein translocase subunit SecF; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_5376738_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7716..8510
DNA (795bp) protein (265aa)
Putative DNase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P4_GEMAT
hydrolase, TatD family
Hydrolase, TatD family {ECO:0000313|EMBL:AHG90731.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_9
unknown

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8533..10179
DNA (1647bp) protein (549aa)

This feature has no annotations

H3-18-all-fractions_k255_5376738_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10269..11981
DNA (1713bp) protein (571aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
H3-18-all-fractions_k255_5376738_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12034..12411
DNA (378bp) protein (126aa)
Putative endoribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P5_GEMAT
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AHG90732.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_12
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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12712..13680
DNA (969bp) protein (323aa)
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
Selenide, water dikinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RI12_MOOTA
H3-18-all-fractions_k255_5376738_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13815..14561
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90733.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14555..15361
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamate racemase
Glutamate racemase id=4607963 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
H3-18-all-fractions_k255_5376738_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15296..16081)
DNA (786bp) protein (262aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P7_GEMAT
Calcineurin-like phosphoesterase superfamily domain protein
Calcineurin-like phosphoesterase superfamily domain protein {ECO:0000313|EMBL:AHG90735.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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16241..16654
DNA (414bp) protein (138aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P8_GEMAT
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AHG90736.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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16665..18743
DNA (2079bp) protein (693aa)
peptidyl-prolyl cis-trans isomerase id=12556596 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
H3-18-all-fractions_k255_5376738_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18740..21613
DNA (2874bp) protein (958aa)
WD40 protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0ML33_9BACT
WD40 domain-containing protein beta Propeller
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H3-18-all-fractions_k255_5376738_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21613..22257
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90737.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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22235..22729
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
Rare lipoprotein B
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-18-all-fractions_k255_5376738_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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22723..23076
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
H3-18-all-fractions_k255_5376738_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23202..23588
DNA (387bp) protein (129aa)
D-beta-D-heptose 1-phosphate adenosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q2_GEMAT
rfaE bifunctional protein
RfaE bifunctional protein {ECO:0000313|EMBL:AHG90739.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_5376738_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23575..24324
DNA (750bp) protein (250aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribonuclease PH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q3_GEMAT
Ribonuclease PH
H3-18-all-fractions_k255_5376738_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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24335..24946
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
HAM1 protein homolog n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q4_GEMAT
Nucleoside-triphosphatase rdgB
Displaying 24 items

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