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S1-16-all-fractions_k255_263622

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_263622_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
NADH dehydrogenase subunit L id=2282433 bin=GWB2_Pelobacter_53_15 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
proton-translocating NADH-quinone oxidoreductase, chain L
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(389..691)
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K id=2024432 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NADH-quinone oxidoreductase subunit K
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_263622_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(699..1232)
DNA (534bp) protein (178aa)
NADH dehydrogenase I subunit J id=5011436 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_263622_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1222..2247)
DNA (1026bp) protein (342aa)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) id=14429490 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2390..3688)
DNA (1299bp) protein (433aa)
nuoF2; NuoF2 NADH:quinone oxidoreductase subunit F2 (EC:1.6.99.5)
NADH dehydrogenase I subunit F id=3193875 bin=GWA1_Deltaproteobacteria_52_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3688..4269)
DNA (582bp) protein (194aa)
NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH dehydrogenase I subunit E id=3272603 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_263622_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4284..5441)
DNA (1158bp) protein (386aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.99.5 1.6.5.3) id=14431024 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.99.5 1.6.5.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5549..6133)
DNA (585bp) protein (195aa)
Phosphoheptose isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=GMHA_ROSS1
phosphoheptose isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_263622_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6130..6681)
DNA (552bp) protein (184aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCD3_THET1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_263622_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6710..7159)
DNA (450bp) protein (150aa)
nqo; NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) (EC:1.6.99.5) id=14633119 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
nqo; NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) (EC:1.6.99.5)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_263622_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7164..7586)
DNA (423bp) protein (141aa)
NADH-quinone oxidoreductase subunit A n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAW8_OXAFO
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7849..9210
DNA (1362bp) protein (454aa)
group 1 glycosyl transferase id=12555635 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_263622_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9243..9512)
DNA (270bp) protein (90aa)
id=12556159 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_263622_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9637..13506
DNA (3870bp) protein (1290aa)
DEAD/H associated domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB32_ANADF
DEAD/DEAH box helicase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 14 items

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