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S1-16-all-fractions_k255_861936

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_861936_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..578)
DNA (576bp) protein (192aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=12554750 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaA; chromosomal replication initiator protein DnaA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_861936_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


1083..1229
DNA (147bp) protein (49aa)
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=12554749 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmH; 50S ribosomal protein L34
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_861936_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1263..1616
DNA (354bp) protein (118aa)
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCK3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_861936_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1850..3604
DNA (1755bp) protein (585aa)
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC id=12554746 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein translocase subunit yidC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_861936_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3613..4062
DNA (450bp) protein (150aa)
putative RNA-binding protein id=12554745 bin=CNBR_ACIDO species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-16-all-fractions_k255_861936_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4081..5448
DNA (1368bp) protein (456aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=12554744 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA modification GTPase trmE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_861936_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5470..7329
DNA (1860bp) protein (620aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme id=12554743 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_861936_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7384..8013
DNA (630bp) protein (210aa)
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.170) id=12554742 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methyltransferase GidB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_861936_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8223..9026
DNA (804bp) protein (268aa)
chromosome segregation ATPase; K03496 chromosome partitioning protein id=12554739 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosome segregation ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-16-all-fractions_k255_861936_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9086..9949
DNA (864bp) protein (288aa)
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family id=12554738 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosome segregation DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_861936_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10057..11025
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037E85CD
selenide, water dikinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_861936_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11143..11568
DNA (426bp) protein (142aa)
ATP synthase subunit b n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZG3_DESAC
H+-transporting two-sector ATPase subunit B/B'
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_861936_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11576..12301
DNA (726bp) protein (242aa)
ATP synthase subunit b id=3256907 bin=GWC2_Proteo_65_14_Ab886 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
H+-transporting two-sector ATPase, B/B' subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_861936_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12294..12839
DNA (546bp) protein (182aa)
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_861936_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12842..14368
DNA (1527bp) protein (509aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.15); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] id=12554736 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_861936_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14415..15350
DNA (936bp) protein (312aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) id=12554735 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP synthase F1 subunit gamma (EC:3.6.3.15)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_861936_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

15366..16811
DNA (1446bp) protein (482aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] id=12554734 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_861936_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16808..17230
DNA (423bp) protein (141aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] id=12554733 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_861936_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17249..18043
DNA (795bp) protein (265aa)
o-antigen export system permease; K09690 lipopolysaccharide transport system permease protein id=12554731 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC-2 type transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-16-all-fractions_k255_861936_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18051..19121
DNA (1071bp) protein (357aa)
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein id=12554730 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 20 items

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